Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL603914.1-201ENST00000401964 204 ntBASIC2.53□□□□□ -2
YIPF4Q9BSR8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.53□□□□□ -2
YIPF4Q9BSR8 Y_RNA.690-201ENST00000516603 95 ntBASIC2.53□□□□□ -2
YIPF4Q9BSR8 RNU6-365P-201ENST00000517113 106 ntBASIC2.53□□□□□ -2
YIPF4Q9BSR8 AC024995.1-201ENST00000523014 93 ntBASIC2.53□□□□□ -2
YIPF4Q9BSR8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.53□□□□□ -2
YIPF4Q9BSR8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 SNORA48.1-201ENST00000390879 135 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 RNU11-5P-201ENST00000391216 129 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 SNORA26-201ENST00000391286 122 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP127-201ENST00000411051 133 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP236-201ENST00000516169 116 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 Y_RNA.692-201ENST00000516627 105 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 AL358944.1-201ENST00000528537 144 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 MIR6129-201ENST00000616087 109 ntBASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
YIPF4Q9BSR8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNU6-834P-201ENST00000362367 110 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNU6-888P-201ENST00000363010 101 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 MIR518F-201ENST00000384973 87 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP323-201ENST00000391094 133 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RN7SKP179-201ENST00000516126 217 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 SNORD33.1-201ENST00000516213 88 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 RNU6-781P-201ENST00000516377 101 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 AC091544.4-201ENST00000555268 342 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 Y_RNA.757-201ENST00000578934 114 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 AC008555.8-201ENST00000623602 2168 ntBASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
YIPF4Q9BSR8 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 SNORD24-201ENST00000383884 75 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU6-476P-201ENST00000384726 107 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU6-1064P-201ENST00000410626 104 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 Y_RNA.617-201ENST00000410920 90 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 FTH1P12-201ENST00000432137 551 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 AL049830.1-201ENST00000468034 425 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU6-504P-201ENST00000516568 104 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 RNU6-126P-201ENST00000516685 103 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 IGKV1-22-201ENST00000524313 326 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 AP002004.2-201ENST00000531656 154 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 AC245060.5-201ENST00000610778 3293 ntBASIC2.5□□□□□ -2.01
YIPF4Q9BSR8 SNORA25.6-201ENST00000364121 118 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 RNU6-1056P-201ENST00000383996 107 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP109-201ENST00000391010 116 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 SNORD77.3-201ENST00000391113 65 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 SNRPGP14-201ENST00000435400 219 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 SNORA18.4-201ENST00000516440 124 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 AC108081.1-201ENST00000604358 221 ntBASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
YIPF4Q9BSR8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU4-82P-201ENST00000362443 140 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 SNORA63.4-201ENST00000362763 126 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU6-153P-201ENST00000364422 104 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU6-1144P-201ENST00000384247 104 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNY4P18-201ENST00000391107 89 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP501-201ENST00000410990 112 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 AC069257.2-201ENST00000441819 155 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU5E-3P-201ENST00000515913 68 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 MIR4762-201ENST00000585261 75 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 AL022345.2-201ENST00000606307 135 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
YIPF4Q9BSR8 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 SNORD58C-201ENST00000365223 64 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 MIRLET7F2-201ENST00000385277 83 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 AF228730.3-201ENST00000436691 102 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 SNRPGP13-201ENST00000442212 177 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 SNORA31.15-201ENST00000516771 132 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 SCARNA15-202ENST00000516881 127 ntBASIC2.47□□□□□ -2.01
YIPF4Q9BSR8 AC010297.1-201ENST00000623948 149 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms