Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SNORD38B-201ENST00000384690 67 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 RNY3P10-201ENST00000384764 102 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 SNORA26-201ENST00000391286 122 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 RNU6-248P-201ENST00000410720 107 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 MCFD2P1-201ENST00000417812 300 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 RNU6-625P-201ENST00000459412 107 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 RNY1P9-201ENST00000532431 109 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 AL355297.3-201ENST00000604082 446 ntBASIC-0.5□□□□□ -2.49
RFX7Q2KHR2 FGF7P2-201ENST00000332473 296 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 SNORD115-41-201ENST00000363608 82 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 MTND1P27-201ENST00000451117 902 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 snoU13.16-201ENST00000459350 104 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 AC107297.1-201ENST00000459991 176 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 MIR4273-201ENST00000582824 84 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 AC019193.3-201ENST00000609144 554 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 AF246928.1-201ENST00000623768 87 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
RFX7Q2KHR2 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 MIR517A-201ENST00000385001 87 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 RNU6-135P-201ENST00000516769 101 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 MIR5696-201ENST00000578474 85 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 MIR3681-201ENST00000580089 72 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 MIR6740-201ENST00000618268 113 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 AP002371.2-201ENST00000624450 503 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 MIR6828-201ENST00000636181 60 ntBASIC-0.52□□□□□ -2.49
RFX7Q2KHR2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 RNU4-28P-201ENST00000364739 141 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 MIR635-201ENST00000384830 98 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 MIR588-201ENST00000384900 83 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 AC090844.1-201ENST00000422019 156 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 MTCO1P20-201ENST00000425366 358 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 AC236972.2-201ENST00000434979 310 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 MTATP6P13-201ENST00000438531 667 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 AC091959.1-201ENST00000495857 238 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 RNU2-60P-201ENST00000517290 128 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 MIR3666-201ENST00000607845 111 ntBASIC-0.53□□□□□ -2.49
RFX7Q2KHR2 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 RNU4-84P-201ENST00000364200 139 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 SNORA72-201ENST00000384339 132 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 MIR215-201ENST00000384858 110 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 MTND2P18-201ENST00000419962 1030 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 RNU6-138P-201ENST00000515952 107 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 MIR4436A-201ENST00000585278 85 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 AC134878.1-201ENST00000619901 243 ntBASIC-0.54□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU6-879P-201ENST00000364328 108 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU7-125P-201ENST00000458760 62 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU7-67P-201ENST00000459003 62 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU6-504P-201ENST00000516568 104 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU6-232P-201ENST00000517144 64 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 MTCO2P4-201ENST00000517968 247 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 IGKV1-22-201ENST00000524313 326 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 AC124303.1-201ENST00000605703 360 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 AC109347.2-201ENST00000610220 349 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 uc_338.28-201ENST00000612082 187 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 JPX_2.1-201ENST00000614161 69 ntBASIC-0.55□□□□□ -2.5
RFX7Q2KHR2 RNU6-268P-201ENST00000364174 107 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 EIF1P2-201ENST00000428233 350 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AC006600.1-201ENST00000572529 153 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AC125232.2-201ENST00000592457 143 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AC006380.1-201ENST00000603598 186 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AC121247.2-201ENST00000604776 136 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AL391262.2-201ENST00000622466 494 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 ZNF299P-201ENST00000406845 1804 ntBASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.56□□□□□ -2.5
RFX7Q2KHR2 RNU6-254P-201ENST00000363377 107 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 RNU6-95P-201ENST00000384697 107 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 SNORD93-201ENST00000408813 74 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 SNORD11.1-201ENST00000459482 85 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 AC083904.1-201ENST00000487828 231 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 PRDX4P1-201ENST00000507189 574 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 RNU2-13P-201ENST00000515909 113 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 RNA5SP47-201ENST00000517230 109 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 MRPS36P3-201ENST00000519284 130 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 AP001328.1-201ENST00000528550 176 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 MIR4752-201ENST00000579672 72 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 MIR3152-201ENST00000579801 74 ntBASIC-0.57□□□□□ -2.5
RFX7Q2KHR2 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms