Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RNU6-561P-201ENST00000516222 102 ntBASIC2.07□□□□□ -2.08
CLCN2P51788 AC097639.2-201ENST00000603159 172 ntBASIC2.07□□□□□ -2.08
CLCN2P51788 uc_338.4-201ENST00000616635 176 ntBASIC2.07□□□□□ -2.08
CLCN2P51788 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
CLCN2P51788 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLCN2P51788 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLCN2P51788 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CLCN2P51788 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLCN2P51788 Y_RNA.267-201ENST00000364679 109 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 RNU6-1138P-201ENST00000365359 106 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 RNU6-1130P-201ENST00000365434 107 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLCN2P51788 AL121914.1-201ENST00000450188 156 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 NDUFA4P2-201ENST00000489989 244 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 MIR3133-201ENST00000583157 78 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 JPX_2.1-201ENST00000614161 69 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.06□□□□□ -2.08
CLCN2P51788 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 SNORD116-18-201ENST00000383961 92 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 Y_RNA.587-201ENST00000391210 103 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AC245047.3-201ENST00000429428 127 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AC233266.1-201ENST00000454518 96 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCN2P51788 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AL049861.1-201ENST00000603130 150 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
CLCN2P51788 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AC242852.1-201ENST00000612151 96 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 AC244015.1-201ENST00000622301 99 ntBASIC2.05□□□□□ -2.08
CLCN2P51788 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCN2P51788 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLCN2P51788 Y_RNA.8-201ENST00000362353 102 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNU6-774P-201ENST00000363238 107 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 Y_RNA.432-201ENST00000384087 111 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 Y_RNA.621-201ENST00000411065 96 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNU4-61P-201ENST00000411243 107 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CLCN2P51788 SNRPGP10-201ENST00000432323 225 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 SNRPGP8-201ENST00000454064 226 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNVU1-2-201ENST00000516326 135 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNU6-197P-201ENST00000516680 100 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 RNU6-126P-201ENST00000516685 103 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 MIR4762-201ENST00000585261 75 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
CLCN2P51788 AL591926.4-201ENST00000616895 298 ntBASIC2.04□□□□□ -2.08
CLCN2P51788 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CLCN2P51788 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CLCN2P51788 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CLCN2P51788 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNU6-449P-201ENST00000383914 107 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNU6-187P-201ENST00000384139 106 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNA5SP109-201ENST00000391010 116 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 AC023449.1-201ENST00000454464 154 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNU1-41P-201ENST00000516161 162 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNU1-48P-201ENST00000516400 162 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNA5SP153-201ENST00000516498 76 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 RNU2-56P-201ENST00000516826 190 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
CLCN2P51788 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
CLCN2P51788 MIR4662B-201ENST00000579498 81 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
CLCN2P51788 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLCN2P51788 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CLCN2P51788 SNORD50.2-201ENST00000365465 70 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 MIR522-201ENST00000385071 87 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 Y_RNA.622-201ENST00000411091 108 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 OR9P1P-201ENST00000496431 281 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 RNU7-149P-201ENST00000516739 59 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 RNU7-28P-201ENST00000516759 62 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.02□□□□□ -2.09
CLCN2P51788 MIR4713-201ENST00000582691 75 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 AC008507.4-201ENST00000585464 127 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 DNAJC19P2-201ENST00000593340 302 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.02□□□□□ -2.09
CLCN2P51788 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLCN2P51788 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
CLCN2P51788 MIR126-201ENST00000362291 85 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 Y_RNA.337-201ENST00000365312 102 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 Y_RNA.400-201ENST00000383963 111 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 RNA5SP482-201ENST00000391269 118 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 AC006461.1-201ENST00000412637 326 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 RNU6-1299P-201ENST00000516316 100 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 RNU6-406P-201ENST00000516470 107 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.01□□□□□ -2.09
CLCN2P51788 Y_RNA.778-201ENST00000620203 90 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 MIR8054-201ENST00000620877 86 ntBASIC2.01□□□□□ -2.09
CLCN2P51788 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLCN2P51788 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
CLCN2P51788 SNORA79-201ENST00000408376 140 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms