Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC013791.1-201ENST00000616619 62 ntBASIC1.42□□□□□ -2.18
ABCD3P28288 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ABCD3P28288 UBE2WP1-201ENST00000362030 340 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 MTND5P22-201ENST00000458380 195 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 TRBVB-201ENST00000477100 408 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCD3P28288 RNU6-635P-201ENST00000516651 102 ntBASIC1.41□□□□□ -2.18
ABCD3P28288 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ABCD3P28288 AC134026.1-201ENST00000623249 2239 ntBASIC1.4□□□□□ -2.18
ABCD3P28288 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
ABCD3P28288 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ABCD3P28288 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 MIR802-201ENST00000390235 94 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 AC023449.1-201ENST00000454464 154 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 Y_RNA.637-201ENST00000459424 114 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 RNU6-1053P-201ENST00000515930 101 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.4□□□□□ -2.19
ABCD3P28288 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ABCD3P28288 MIR378A-201ENST00000362177 66 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 Y_RNA.16-201ENST00000362421 102 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 Y_RNA.217-201ENST00000364214 105 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 SNORA63C-201ENST00000364578 129 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 RNU6-442P-201ENST00000383968 104 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 BTF3P11-201ENST00000426582 477 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 Y_RNA.641-201ENST00000459414 105 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 RNU6-570P-201ENST00000517051 105 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 RPL23AP91-201ENST00000569211 455 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 MIR5692C2-201ENST00000577959 77 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 MIR4719-201ENST00000585233 84 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
ABCD3P28288 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCD3P28288 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCD3P28288 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCD3P28288 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 MIR548F4-201ENST00000408515 105 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCD3P28288 SNORD111.1-201ENST00000516421 86 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 AC090142.3-201ENST00000519012 385 ntBASIC1.38□□□□□ -2.19
ABCD3P28288 MIR367-201ENST00000362299 68 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 Y_RNA.238-201ENST00000364441 102 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 RNU6-662P-201ENST00000384253 104 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 RNU6-738P-201ENST00000384531 106 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 RNA5SP496-201ENST00000391240 109 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 SNORD11-201ENST00000459124 84 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 NDUFA4P2-201ENST00000489989 244 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 SNORA31.4-201ENST00000516049 129 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 DEFB108E-201ENST00000524692 240 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCD3P28288 MIR5688-201ENST00000580619 83 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 AC008507.4-201ENST00000585464 127 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.37□□□□□ -2.19
ABCD3P28288 AL442644.1-201ENST00000454390 3105 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR335-201ENST00000362173 94 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 Y_RNA.14-201ENST00000362415 103 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 Y_RNA.164-201ENST00000363709 102 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 Y_RNA.176-201ENST00000363815 109 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 Y_RNA.275-201ENST00000364726 110 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 Y_RNA.574-201ENST00000384766 95 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR1302-6-201ENST00000408466 90 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 RNA5SP247-201ENST00000411181 105 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MTATP8P1-201ENST00000467115 207 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 SCARNA24.2-201ENST00000516968 130 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 SNORA74.3-201ENST00000517108 154 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCD3P28288 AL117187.1-201ENST00000555482 181 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR4724-201ENST00000579485 89 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCD3P28288 AC008737.2-201ENST00000599446 118 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 AP001282.2-201ENST00000616149 309 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 MIR8062-201ENST00000621515 85 ntBASIC1.36□□□□□ -2.19
ABCD3P28288 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 Y_RNA.4-201ENST00000362333 112 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 Y_RNA.376-201ENST00000365638 108 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCD3P28288 RNU6-947P-201ENST00000516264 106 ntBASIC1.35□□□□□ -2.19
ABCD3P28288 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ABCD3P28288 Y_RNA.44-201ENST00000362676 108 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 RNU6-238P-201ENST00000363313 106 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms