Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC109327.2-201ENST00000448339 378 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.76□□□□□ -2.53
CXCL1P09341 SNORD11.1-201ENST00000459482 85 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AC107297.1-201ENST00000459991 176 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.76□□□□□ -2.53
CXCL1P09341 SNORA31.14-201ENST00000516728 116 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 RNU6-897P-201ENST00000517135 105 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 MIR4263-201ENST00000584745 83 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 MIR8055-201ENST00000610739 97 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AC006441.5-201ENST00000612680 209 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AL442067.1-201ENST00000613261 223 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 AL391262.2-201ENST00000622466 494 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 MIR101-1-201ENST00000362265 75 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 RNU6-254P-201ENST00000363377 107 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 RNU6-740P-201ENST00000364734 105 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 MIR514A2-201ENST00000385131 88 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 MIR514A3-201ENST00000385132 88 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 MIR620-201ENST00000385232 95 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 MTCO2P19-201ENST00000427513 598 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 AC087499.4-201ENST00000448505 178 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.77□□□□□ -2.53
CXCL1P09341 AL162726.3-218ENST00000636401 95 ntBASIC-0.77□□□□□ -2.53
CXCL1P09341 SNORA72.3-201ENST00000365074 132 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 RNA5SP451-201ENST00000410588 110 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 RNU4-83P-201ENST00000410863 133 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 RNU2-61P-201ENST00000411069 191 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 MTND4P19-201ENST00000446659 478 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 RNU7-73P-201ENST00000458743 63 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 MIR6779-201ENST00000617283 64 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 MIR4788-201ENST00000639104 80 ntBASIC-0.78□□□□□ -2.53
CXCL1P09341 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 SNORA75.1-201ENST00000391130 148 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 AL031003.1-201ENST00000404229 172 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 RNU6-284P-201ENST00000411105 106 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.79□□□□□ -2.54
CXCL1P09341 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 AC008507.4-201ENST00000585464 127 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 POLR3GP1-201ENST00000594073 261 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 AC006380.1-201ENST00000603598 186 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 AC124303.1-201ENST00000605703 360 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 AC244669.1-204ENST00000621564 178 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 MIR6514-201ENST00000622549 70 ntBASIC-0.79□□□□□ -2.54
CXCL1P09341 RNY1P16-201ENST00000363063 111 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RNU6-553P-201ENST00000364047 96 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RNU6-522P-201ENST00000364497 107 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 SNORA69-201ENST00000383895 132 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RNY3P10-201ENST00000384764 102 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.8□□□□□ -2.54
CXCL1P09341 AL353193.1-201ENST00000421444 268 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RPS29P8-201ENST00000445109 171 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.8□□□□□ -2.54
CXCL1P09341 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.8□□□□□ -2.54
CXCL1P09341 AC026782.1-201ENST00000512952 449 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 SNORA40.9-201ENST00000515895 93 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RNU6-765P-201ENST00000516916 99 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC138749.4-201ENST00000563970 127 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 MIR3925-201ENST00000584674 77 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC096720.1-201ENST00000604441 183 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC019193.3-201ENST00000609144 554 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 AC079248.2-201ENST00000623779 326 ntBASIC-0.8□□□□□ -2.54
CXCL1P09341 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 RNU4-75P-201ENST00000364621 146 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 RNU6-192P-201ENST00000391253 100 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 SNORD93-201ENST00000408813 74 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 MIR378D2-201ENST00000580636 98 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 MIR4802-201ENST00000581881 80 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 JPX_2.1-201ENST00000614161 69 ntBASIC-0.81□□□□□ -2.54
CXCL1P09341 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 RPL21P38-201ENST00000418090 167 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 MTND3P21-201ENST00000433774 331 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 MTND3P16-201ENST00000452205 344 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 RNU7-67P-201ENST00000459003 62 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 MIR4677-201ENST00000584153 80 ntBASIC-0.82□□□□□ -2.54
CXCL1P09341 SNORD115-34-201ENST00000362441 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-12-201ENST00000362583 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-29-201ENST00000362834 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-9-201ENST00000362912 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-21-201ENST00000362963 81 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-14-201ENST00000363090 81 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-13-201ENST00000363358 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-41-201ENST00000363608 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-11-201ENST00000363616 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-5-201ENST00000363633 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-39-201ENST00000363694 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-4-201ENST00000363810 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-16-201ENST00000363887 82 ntBASIC-0.83□□□□□ -2.54
CXCL1P09341 SNORD115-6-201ENST00000363942 82 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms