Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 HMGN2P39-201ENST00000398005 273 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 AC097510.1-201ENST00000510945 133 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 RNU1-95P-201ENST00000516357 160 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 RNU1-128P-201ENST00000516704 160 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 EIF4BP1-201ENST00000554881 351 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 AC012314.7-201ENST00000619693 93 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
PITPNM1O00562 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PITPNM1O00562 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PITPNM1O00562 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PITPNM1O00562 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PITPNM1O00562 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 SNORA5A-201ENST00000384111 134 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 SNORD96B-201ENST00000386148 79 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 MICF-203ENST00000432679 129 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.41□□□□□ -1.7
PITPNM1O00562 AC087499.8-201ENST00000578406 226 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 AC007179.3-201ENST00000604976 235 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 AL096861.1-201ENST00000610899 123 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 AL662814.1-201ENST00000617364 121 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 SCARNA15.3-201ENST00000626315 122 ntBASIC4.41□□□□□ -1.7
PITPNM1O00562 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC4.41□□□□□ -1.7
PITPNM1O00562 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PITPNM1O00562 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PITPNM1O00562 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
PITPNM1O00562 RNU6-525P-201ENST00000363685 104 ntBASIC4.4□□□□□ -1.71
PITPNM1O00562 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.4□□□□□ -1.71
PITPNM1O00562 SNORA74.3-201ENST00000517108 154 ntBASIC4.4□□□□□ -1.71
PITPNM1O00562 AC121758.2-201ENST00000553271 193 ntBASIC4.4□□□□□ -1.71
PITPNM1O00562 AL138721.1-201ENST00000616756 179 ntBASIC4.4□□□□□ -1.71
PITPNM1O00562 U6.109-201ENST00000636749 87 ntBASIC4.4□□□□□ -1.71
PITPNM1O00562 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.4□□□□□ -1.71
PITPNM1O00562 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PITPNM1O00562 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PITPNM1O00562 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
PITPNM1O00562 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 Y_RNA.119-201ENST00000363301 96 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 SNORA9-201ENST00000384215 133 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 MIR592-201ENST00000384959 97 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 SNORA3.3-201ENST00000408712 125 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 RNU7-143P-201ENST00000516781 65 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 SCARNA11.3-201ENST00000517276 130 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
PITPNM1O00562 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.39□□□□□ -1.71
PITPNM1O00562 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PITPNM1O00562 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PITPNM1O00562 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PITPNM1O00562 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PITPNM1O00562 SNORA16B-201ENST00000364674 135 ntBASIC4.38□□□□□ -1.71
PITPNM1O00562 RNA5SP179-201ENST00000517284 121 ntBASIC4.38□□□□□ -1.71
PITPNM1O00562 AC244505.7-201ENST00000599675 272 ntBASIC4.38□□□□□ -1.71
PITPNM1O00562 MIR7157-201ENST00000635801 60 ntBASIC4.38□□□□□ -1.71
PITPNM1O00562 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
PITPNM1O00562 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PITPNM1O00562 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PITPNM1O00562 Y_RNA.239-201ENST00000364444 113 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 SNORA24B-201ENST00000384176 131 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 SNORA11.4-201ENST00000408823 129 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 RNU6-667P-201ENST00000517186 102 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 UBL5P2-201ENST00000583788 219 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.37□□□□□ -1.71
PITPNM1O00562 AC091167.4-201ENST00000605079 184 ntBASIC4.37□□□□□ -1.71
PITPNM1O00562 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PITPNM1O00562 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PITPNM1O00562 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PITPNM1O00562 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PITPNM1O00562 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.37□□□□□ -1.71
PITPNM1O00562 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PITPNM1O00562 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PITPNM1O00562 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 Y_RNA.375-201ENST00000365625 101 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 MIR218-1-201ENST00000384999 110 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 MIR483-201ENST00000385070 76 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 MIR34B-201ENST00000385076 84 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PITPNM1O00562 RPS27P16-201ENST00000425758 201 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 RNU2-19P-201ENST00000517288 84 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.36□□□□□ -1.71
PITPNM1O00562 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PITPNM1O00562 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PITPNM1O00562 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PITPNM1O00562 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.35□□□□□ -1.71
PITPNM1O00562 SNORD38B-201ENST00000384690 67 ntBASIC4.35□□□□□ -1.71
PITPNM1O00562 MIR5089-201ENST00000580047 84 ntBASIC4.35□□□□□ -1.71
PITPNM1O00562 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
PITPNM1O00562 DLEU2_3.2-201ENST00000612883 73 ntBASIC4.35□□□□□ -1.71
PITPNM1O00562 SNORD38B-202ENST00000625943 69 ntBASIC4.35□□□□□ -1.71
PITPNM1O00562 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.35□□□□□ -1.71
PITPNM1O00562 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PITPNM1O00562 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PITPNM1O00562 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PITPNM1O00562 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PITPNM1O00562 GABRG2-229ENST00000641017 3628 ntBASIC4.34□□□□□ -1.71
PITPNM1O00562 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms