Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.713-201ENST00000517013 96 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 CYP3A52P-201ENST00000563326 91 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC106754.2-201ENST00000623006 233 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD33-201ENST00000362761 85 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU4-80P-201ENST00000363200 141 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-1048P-201ENST00000364054 107 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA33.2-201ENST00000365413 134 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.380-201ENST00000365663 111 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.389-201ENST00000383924 113 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.456-201ENST00000384232 111 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA72-201ENST00000384339 132 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR7-2-201ENST00000384970 110 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.581-201ENST00000391017 97 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA26.5-201ENST00000391215 123 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-855P-201ENST00000410395 104 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC104332.1-201ENST00000440471 797 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 snoU13.25-201ENST00000458945 104 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 SEPT14P8-201ENST00000508026 178 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC044792.1-201ENST00000593294 196 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 AP003357.1-201ENST00000604497 148 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD113-5-201ENST00000607261 78 ntBASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.91□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-833P-201ENST00000363486 107 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.276-201ENST00000364732 109 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.341-201ENST00000365341 102 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-969P-201ENST00000383900 105 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.455-201ENST00000384230 98 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.541-201ENST00000384640 113 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-710P-201ENST00000410424 105 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RPL21P38-201ENST00000418090 167 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNRPGP10-201ENST00000432323 225 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-764P-201ENST00000516396 105 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU7-115P-201ENST00000516433 55 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.721-201ENST00000517207 102 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC136628.3-201ENST00000521868 290 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC019288.1-201ENST00000557918 224 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL356055.1-201ENST00000602528 446 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL513534.2-201ENST00000603836 250 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR376A1-201ENST00000616574 68 ntBASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TMX2-CTNND1H3BSU7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-199P-201ENST00000362954 107 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-770P-201ENST00000363929 105 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-985P-201ENST00000410182 104 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.637-201ENST00000459424 114 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC114811.1-201ENST00000507207 168 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU7-12P-201ENST00000516030 62 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC131281.1-201ENST00000522984 164 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC024405.2-202ENST00000532731 184 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC090049.2-201ENST00000550377 109 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR3937-201ENST00000580135 106 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL355297.3-201ENST00000604082 446 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC027279.3-201ENST00000625055 122 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC068647.2-201ENST00000637380 353 ntBASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNA5SP327-201ENST00000362494 101 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.64-201ENST00000362845 102 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORD50B-201ENST00000364995 70 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORA72.4-201ENST00000384174 132 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.602-201ENST00000410535 92 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 PIGPP3-201ENST00000425307 415 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC005534.2-201ENST00000431047 433 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 MTCO1P5-201ENST00000433573 344 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC117454.1-201ENST00000491120 168 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC127455.1-201ENST00000565496 145 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 POLR3GP1-201ENST00000594073 261 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC120024.3-201ENST00000603167 156 ntBASIC0.88□□□□□ -2.27
TMX2-CTNND1H3BSU7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.11-201ENST00000362375 109 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORD68-201ENST00000363214 84 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.202-201ENST00000364083 110 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.210-201ENST00000364161 110 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.326-201ENST00000365176 113 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORA2.2-201ENST00000365473 135 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC117470.1-201ENST00000381974 330 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-21P-201ENST00000384710 107 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms