Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 Y_RNA.230-201ENST00000364348 109 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.329-201ENST00000365209 107 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.341-201ENST00000365341 102 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR628-201ENST00000385229 95 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-205P-201ENST00000390858 107 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.605-201ENST00000410577 105 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 SNORD83.1-201ENST00000411362 77 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 MCFD2P1-201ENST00000417812 300 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 MTCO2P27-201ENST00000420740 428 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RPL30P15-201ENST00000457129 321 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU7-169P-201ENST00000459456 61 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RPL23AP54-201ENST00000495129 419 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-1213P-201ENST00000517075 94 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR548AO-201ENST00000579992 96 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 AC060780.3-201ENST00000589464 80 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RBM11P1-201ENST00000604951 799 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 AC090517.2-201ENST00000614966 680 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 AC011476.5-201ENST00000615594 130 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-369P-201ENST00000362515 102 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-623P-201ENST00000363143 105 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 MTCO3P10-201ENST00000455912 772 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 HMGN1P10-201ENST00000474557 553 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU7-181P-201ENST00000517234 74 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 RN7SKP295-201ENST00000517264 153 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 AC011712.1-201ENST00000588959 234 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 MTND1P7-201ENST00000632801 297 ntBASIC0.2□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.516-201ENST00000384541 124 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR1277-201ENST00000408536 78 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 AC024067.1-201ENST00000426199 223 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 snoU13.21-201ENST00000459368 105 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 NDUFA4P2-201ENST00000489989 244 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR4659A-201ENST00000580269 81 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR4264-201ENST00000583520 66 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 AC022441.3-201ENST00000605737 136 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR4791-201ENST00000607666 84 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR6515-201ENST00000619843 57 ntBASIC0.19□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.122-201ENST00000363331 96 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-268P-201ENST00000364174 107 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.796-201ENST00000364268 102 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.799-201ENST00000364992 102 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.456-201ENST00000384232 111 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 AC016907.1-201ENST00000419483 435 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-718P-201ENST00000516166 105 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 SNORA25.12-201ENST00000516202 82 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-1007P-201ENST00000516586 107 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 AC024405.2-202ENST00000532731 184 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 AC005730.3-201ENST00000583067 366 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 AP003357.1-201ENST00000604497 148 ntBASIC0.18□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-1209P-201ENST00000363655 107 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 SNORD45.3-201ENST00000363836 72 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.242-201ENST00000364473 110 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-580P-201ENST00000365159 107 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-847P-201ENST00000411115 108 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 AC015818.7-201ENST00000428754 109 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 AC087499.7-201ENST00000441958 109 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 AC005042.3-201ENST00000453230 174 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.635-201ENST00000459041 101 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-120P-201ENST00000516077 103 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-966P-201ENST00000516479 104 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR4804-201ENST00000581683 73 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR2681-201ENST00000581814 105 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 MIR5188-201ENST00000583467 113 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 uc_338.4-201ENST00000616635 176 ntBASIC0.17□□□□□ -2.38
TRBV9A0A0B4J1U6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.310-201ENST00000365063 113 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-1175P-201ENST00000365200 107 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6-679P-201ENST00000391003 106 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 SNORA75.6-201ENST00000391318 127 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 SNRPGP14-201ENST00000435400 219 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 snoU13.18-201ENST00000459483 104 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 AC127455.1-201ENST00000565496 145 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 AC008507.4-201ENST00000585464 127 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 AC002553.4-201ENST00000616896 331 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 U2.1-201ENST00000618978 145 ntBASIC0.16□□□□□ -2.38
TRBV9A0A0B4J1U6 RNY3P11-201ENST00000364153 102 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 Y_RNA.355-201ENST00000365462 98 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 RNU6-1215P-201ENST00000384441 102 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 MIR598-201ENST00000384868 97 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 AL590004.1-201ENST00000405321 300 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 MIR548F1-201ENST00000408667 84 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 RNU7-30P-201ENST00000516835 62 ntBASIC0.15□□□□□ -2.39
TRBV9A0A0B4J1U6 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms