Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL445435.1-201ENST00000604232 665 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 AC072039.2-201ENST00000608883 439 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 AC139792.3-201ENST00000623525 224 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNU6-403P-201ENST00000363163 104 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNU6-777P-201ENST00000364265 104 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNU6-609P-201ENST00000365459 107 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNU6-323P-201ENST00000521915 107 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 AC012414.2-201ENST00000559474 187 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 AC069545.1-201ENST00000605671 358 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 AL133255.1-201ENST00000606374 441 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNA5SP494-201ENST00000410653 129 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 AL445193.1-201ENST00000441183 141 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RPL39P25-201ENST00000449384 154 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNU7-51P-201ENST00000516560 62 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 RNU7-161P-201ENST00000517289 62 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 AL049777.1-201ENST00000622740 518 ntBASIC-1.57□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 RNU6-117P-201ENST00000365415 107 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 U8.19-201ENST00000459095 133 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 U8.22-201ENST00000459141 133 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 GMFBP1-201ENST00000467831 427 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 snoU83B.1-201ENST00000517136 88 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 AC091965.4-201ENST00000607691 587 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 AL512506.1-201ENST00000613918 449 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 AC009159.2-201ENST00000617603 606 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 Z97988.1-201ENST00000637697 135 ntBASIC-1.58□□□□□ -2.66
SCN11AQ9UI33 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 MIR20A-201ENST00000362279 71 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 SNORD115-8-201ENST00000363856 82 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 SNORD115-38-201ENST00000365037 82 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU6-131P-201ENST00000391144 107 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AC016907.1-201ENST00000419483 435 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 MTATP6P14-201ENST00000455189 673 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU7-181P-201ENST00000517234 74 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 MIR6854-201ENST00000614935 69 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 SNORA27.1-201ENST00000362604 124 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU6-407P-201ENST00000365280 104 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AC236972.2-201ENST00000434979 310 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 RNU7-55P-201ENST00000459426 62 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 MIR3684-201ENST00000579779 74 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 AC073539.2-201ENST00000597113 165 ntBASIC-1.59□□□□□ -2.66
SCN11AQ9UI33 SNORD87-201ENST00000364849 89 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 RNU6-442P-201ENST00000383968 104 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 SNORA20B-201ENST00000384220 132 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 RNU6-387P-201ENST00000411331 105 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 AC137499.1-201ENST00000427602 88 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 snoU13.6-201ENST00000458785 104 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 POLR3GP2-201ENST00000588366 668 ntBASIC-1.6□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 RNU6-291P-201ENST00000384720 107 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 AC105417.1-201ENST00000514691 285 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 SNORA25.14-201ENST00000516481 132 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 MTND1P5-201ENST00000517906 940 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 MTND3P13-201ENST00000574391 343 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 AC092574.1-201ENST00000609771 420 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 AC011603.4-201ENST00000611325 277 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 AC127459.3-201ENST00000624328 466 ntBASIC-1.61□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNA5SP245-201ENST00000364239 121 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNU6-61P-201ENST00000365528 109 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 MIR487A-201ENST00000385009 80 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AL354751.2-201ENST00000415471 210 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 MTND4LP14-201ENST00000429447 288 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AC108059.2-201ENST00000434626 151 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AL137792.2-201ENST00000443484 235 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AC022784.5-201ENST00000522241 437 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AC090616.2-202ENST00000584248 222 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RPL30P15-201ENST00000457129 321 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 RNU6-437P-201ENST00000459408 95 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 SERF1AP1-201ENST00000514575 187 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AL136370.1-201ENST00000608166 691 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 AC132825.6-201ENST00000638861 357 ntBASIC-1.62□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.63□□□□□ -2.67
SCN11AQ9UI33 SNORD2-201ENST00000459163 69 ntBASIC-1.63□□□□□ -2.67
SCN11AQ9UI33 RNU6-329P-201ENST00000459618 107 ntBASIC-1.63□□□□□ -2.67
SCN11AQ9UI33 AC022616.4-201ENST00000522985 181 ntBASIC-1.63□□□□□ -2.67
SCN11AQ9UI33 RNU6-88P-201ENST00000606801 100 ntBASIC-1.63□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms