Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 Y_RNA.39-201ENST00000362620 98 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU4-73P-201ENST00000363164 141 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD68-201ENST00000363214 84 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.253-201ENST00000364562 112 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.579-201ENST00000390939 94 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 PIGPP3-201ENST00000425307 415 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AL160004.2-201ENST00000432935 350 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AC245047.7-201ENST00000440265 293 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AC104332.1-201ENST00000440471 797 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.661-201ENST00000516003 99 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AC022616.4-201ENST00000522985 181 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR4795-201ENST00000584182 89 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AC005972.2-201ENST00000604690 348 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AL121655.1-201ENST00000605811 308 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 AL008636.1-201ENST00000625038 1018 ntBASIC0.82□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.80-201ENST00000362996 102 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU1-124P-201ENST00000363861 145 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.197-201ENST00000364004 102 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.310-201ENST00000365063 113 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.485-201ENST00000384395 102 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-1105P-201ENST00000384774 107 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.621-201ENST00000411065 96 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 AL390729.2-201ENST00000416137 156 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 AC114811.1-201ENST00000507207 168 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 AL357312.1-201ENST00000603879 298 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.772-201ENST00000606692 102 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 BX284668.6-201ENST00000606899 438 ntBASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.336-201ENST00000365307 109 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.368-201ENST00000365547 113 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-163P-201ENST00000384396 106 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR522-201ENST00000385071 87 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 MTND1P14-201ENST00000427400 950 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 snoU13.25-201ENST00000458945 104 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORA31.4-201ENST00000516049 129 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 AL133255.1-201ENST00000606374 441 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.804-201ENST00000615262 101 ntBASIC0.8□□□□□ -2.28
CDC42EP4Q9H3Q1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.331-201ENST00000365267 102 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.395-201ENST00000383945 109 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-1323P-201ENST00000384025 107 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD63-201ENST00000384262 68 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORA72-201ENST00000384339 132 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 MT-TD-201ENST00000387419 68 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-855P-201ENST00000410395 104 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-710P-201ENST00000410424 105 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 MTATP6P23-201ENST00000440153 476 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 AC010655.3-201ENST00000478818 450 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 AL117351.2-201ENST00000513571 157 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 RPS29P30-201ENST00000600975 111 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 DEFB117-201ENST00000602356 141 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 AL080274.1-201ENST00000605565 220 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 uc_338.22-201ENST00000622722 187 ntBASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR373-201ENST00000362273 69 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.456-201ENST00000384232 111 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.551-201ENST00000384661 102 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR19B1-201ENST00000384829 87 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR452-201ENST00000385020 85 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD12-201ENST00000391002 90 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AL590004.1-201ENST00000405321 300 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-130P-201ENST00000411112 103 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 RPS26P48-201ENST00000491713 339 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-475P-201ENST00000516073 104 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AC011373.1-201ENST00000607270 237 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AC006157.1-201ENST00000611750 366 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 PART1_1.1-201ENST00000611761 217 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AC007485.1-201ENST00000616755 206 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 AL442644.1-201ENST00000454390 3105 ntBASIC0.78□□□□□ -2.28
CDC42EP4Q9H3Q1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.341-201ENST00000365341 102 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD42.2-201ENST00000365570 69 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 AC117470.1-201ENST00000381974 330 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.439-201ENST00000384119 94 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms