Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNA5SP445-201ENST00000515889 115 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 RNU7-116P-201ENST00000516940 62 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 RNU2-31P-201ENST00000516954 155 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.66□□□□□ -2.14
USP44Q9H0E7 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 AC005972.2-201ENST00000604690 348 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 SNORA1B-201ENST00000362535 133 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 RNU6-801P-201ENST00000364087 105 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 RNU6-326P-201ENST00000365480 107 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 RNU6-472P-201ENST00000384299 107 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 MIR568-201ENST00000385036 95 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AC233266.1-201ENST00000454518 96 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AL049830.1-201ENST00000468034 425 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 TRBVB-201ENST00000477100 408 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 MTCO2P24-201ENST00000515611 426 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 RNU6-1338P-201ENST00000516328 91 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AC242852.1-201ENST00000612151 96 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AP001282.2-201ENST00000616149 309 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AC244015.1-201ENST00000622301 99 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 AC068647.2-201ENST00000637380 353 ntBASIC1.65□□□□□ -2.15
USP44Q9H0E7 Y_RNA.149-201ENST00000363558 117 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 Y_RNA.483-201ENST00000384380 101 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 MIR513A1-201ENST00000385138 129 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 SNORA53-201ENST00000391141 249 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 RNU2-14P-201ENST00000411053 191 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 RNU6-902P-201ENST00000517212 91 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 AC136628.3-201ENST00000521868 290 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 DEFB108E-201ENST00000524692 240 ntBASIC1.64□□□□□ -2.15
USP44Q9H0E7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.64□□□□□ -2.15
USP44Q9H0E7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP44Q9H0E7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP44Q9H0E7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
USP44Q9H0E7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 Y_RNA.396-201ENST00000383949 103 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 Y_RNA.461-201ENST00000384263 103 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 MIR660-201ENST00000385235 97 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 MIR758-201ENST00000390227 88 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 SNORA40.6-201ENST00000391153 128 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
USP44Q9H0E7 MTCYBP9-201ENST00000431021 303 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 STAG3L5P-204ENST00000443759 179 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 SERF1AP1-201ENST00000514575 187 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 AC011604.1-201ENST00000545978 196 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.63□□□□□ -2.15
USP44Q9H0E7 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
USP44Q9H0E7 SNORA25.1-201ENST00000362326 128 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 U8.7-201ENST00000364940 136 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 SNORA72-201ENST00000384339 132 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 SNORA26.5-201ENST00000391215 123 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 MIR1302-6-201ENST00000408466 90 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 AC104332.1-201ENST00000440471 797 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 AC091959.1-201ENST00000495857 238 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 OR9P1P-201ENST00000496431 281 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.62□□□□□ -2.15
USP44Q9H0E7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
USP44Q9H0E7 AL353770.2-201ENST00000620024 78 ntBASIC1.62□□□□□ -2.15
USP44Q9H0E7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
USP44Q9H0E7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USP44Q9H0E7 MIR126-201ENST00000362291 85 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 SNORA72.4-201ENST00000384174 132 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.61□□□□□ -2.15
USP44Q9H0E7 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 MTND3P2-201ENST00000438452 342 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AC117454.1-201ENST00000491120 168 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 RNU7-115P-201ENST00000516433 55 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AC024405.2-202ENST00000532731 184 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
USP44Q9H0E7 AL512605.2-201ENST00000592972 256 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 POLR3GP1-201ENST00000594073 261 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AP003357.1-201ENST00000604497 148 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AC037487.3-201ENST00000606668 112 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AL121890.5-201ENST00000620848 304 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 SNORD3E-202ENST00000627253 216 ntBASIC1.61□□□□□ -2.15
USP44Q9H0E7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.6□□□□□ -2.15
USP44Q9H0E7 AL391987.6-201ENST00000305671 199 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USP44Q9H0E7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 RNU6-662P-201ENST00000384253 104 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 RNU6-763P-201ENST00000390865 106 ntBASIC1.6□□□□□ -2.15
USP44Q9H0E7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.6□□□□□ -2.15
USP44Q9H0E7 RNU7-141P-201ENST00000459304 62 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms