Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.58□□□□□ -2
YIPF4Q9BSR8 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 RNU6-341P-201ENST00000516973 96 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 Y_RNA.712-201ENST00000517011 92 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 AC131055.1-201ENST00000584626 316 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 AL591926.4-201ENST00000616895 298 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.58□□□□□ -2
YIPF4Q9BSR8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
YIPF4Q9BSR8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
YIPF4Q9BSR8 Y_RNA.52-201ENST00000362760 96 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RNU6-862P-201ENST00000362804 105 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RNU6-1325P-201ENST00000364905 105 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RNU1-51P-201ENST00000365345 176 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
YIPF4Q9BSR8 SNORA40.5-201ENST00000391061 128 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 AL606517.2-201ENST00000442855 241 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RNU6-772P-201ENST00000516042 105 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR4435-1-201ENST00000582552 80 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.57□□□□□ -2
YIPF4Q9BSR8 AC008507.4-201ENST00000585464 127 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 U1.36-201ENST00000620684 176 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
YIPF4Q9BSR8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
YIPF4Q9BSR8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
YIPF4Q9BSR8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
YIPF4Q9BSR8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
YIPF4Q9BSR8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.56□□□□□ -2
YIPF4Q9BSR8 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 SNORD61-201ENST00000384252 73 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 MIR548A2-201ENST00000384956 97 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 AL035461.1-201ENST00000421490 332 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 CST2P1-201ENST00000425770 87 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 HMGN2P3-201ENST00000433603 273 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 HMGN2P5-201ENST00000436882 273 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 AC023449.1-201ENST00000454464 154 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 AL163195.1-201ENST00000496941 348 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 MIR3121-201ENST00000579680 77 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 MIR3162-201ENST00000581818 82 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 AL365205.2-201ENST00000594586 68 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 MTND5P32-201ENST00000560711 1802 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.56□□□□□ -2
YIPF4Q9BSR8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
YIPF4Q9BSR8 AL391516.1-201ENST00000554380 2449 ntBASIC2.56□□□□□ -2
YIPF4Q9BSR8 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RNU6-309P-201ENST00000364573 106 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 SNORA8-201ENST00000384574 139 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.55□□□□□ -2
YIPF4Q9BSR8 Y_RNA.630-201ENST00000411370 108 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
YIPF4Q9BSR8 AL158147.1-201ENST00000443970 75 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.55□□□□□ -2
YIPF4Q9BSR8 RN7SL429P-201ENST00000479090 223 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RN7SL489P-201ENST00000486185 223 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RN7SL327P-201ENST00000488659 223 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RNU1-142P-201ENST00000516682 145 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RNU6-919P-201ENST00000516731 104 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 AC090049.2-201ENST00000550377 109 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 MIR4662B-201ENST00000579498 81 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 AC022217.4-201ENST00000604389 163 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 RN7SL853P-201ENST00000617250 223 ntBASIC2.55□□□□□ -2
YIPF4Q9BSR8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
YIPF4Q9BSR8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
YIPF4Q9BSR8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
YIPF4Q9BSR8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.54□□□□□ -2
YIPF4Q9BSR8 Y_RNA.114-201ENST00000363265 113 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR597-201ENST00000384968 97 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR522-201ENST00000385071 87 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR624-201ENST00000385217 97 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR891A-201ENST00000401237 79 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.54□□□□□ -2
YIPF4Q9BSR8 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 Y_RNA.651-201ENST00000459380 103 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 AC055731.1-201ENST00000474387 401 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 Y_RNA.666-201ENST00000516187 112 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 RNU6-1270P-201ENST00000517128 108 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR3129-201ENST00000581095 76 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR376A2-201ENST00000636782 80 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 MIR3914-2-201ENST00000637339 95 ntBASIC2.54□□□□□ -2
YIPF4Q9BSR8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
YIPF4Q9BSR8 MIR126-201ENST00000362291 85 ntBASIC2.53□□□□□ -2
YIPF4Q9BSR8 RNA5SP126-201ENST00000365092 109 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms