Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC112487.2-201ENST00000637950 304 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.6□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.5-201ENST00000362334 102 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-1115P-201ENST00000362490 106 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-833P-201ENST00000363486 107 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.263-201ENST00000364659 114 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-1175P-201ENST00000365200 107 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNY3P14-201ENST00000384309 102 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-163P-201ENST00000384396 106 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-342P-201ENST00000384521 104 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU6-910P-201ENST00000390844 107 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AL451046.2-201ENST00000403074 277 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AF228730.4-201ENST00000421457 183 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 MTND1P14-201ENST00000427400 950 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AC114811.1-201ENST00000507207 168 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.661-201ENST00000516003 99 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RNU4-77P-201ENST00000516692 156 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 SNORA70.22-201ENST00000517160 124 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 MIR548S-201ENST00000581352 82 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 MIR4801-201ENST00000582704 82 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 MIR5188-201ENST00000583467 113 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AC092447.9-201ENST00000603395 144 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 RBM11P1-201ENST00000604951 799 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 AL008636.1-201ENST00000625038 1018 ntBASIC0.59□□□□□ -2.31
TNFRSF9Q07011 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.70-201ENST00000362886 110 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 SNORD81.1-201ENST00000363064 77 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.230-201ENST00000364348 109 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 SNORD114-24-201ENST00000365029 72 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.458-201ENST00000384240 102 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 RNU6-1009P-201ENST00000390996 107 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 MIR891A-201ENST00000401237 79 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.58□□□□□ -2.32
TNFRSF9Q07011 MCFD2P1-201ENST00000417812 300 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 AC245047.7-201ENST00000440265 293 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 MTND5P20-201ENST00000448677 143 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 snoU13.25-201ENST00000458945 104 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 AC005972.2-201ENST00000604690 348 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 SNORD58B-201ENST00000607313 66 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 AL442644.1-201ENST00000454390 3105 ntBASIC0.58□□□□□ -2.32
TNFRSF9Q07011 RNU4-79P-201ENST00000362764 141 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 RNU1-133P-201ENST00000364867 167 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.315-201ENST00000365117 102 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.570-201ENST00000384750 101 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.579-201ENST00000390939 94 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 MIR1298-201ENST00000408783 112 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 MLLT10P1-201ENST00000418346 262 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFRSF9Q07011 RPS20P10-201ENST00000451209 253 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC010655.3-201ENST00000478818 450 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 RPS26P48-201ENST00000491713 339 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 PDCD5P2-201ENST00000507570 312 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 RN7SKP295-201ENST00000517264 153 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AL096861.1-201ENST00000610899 123 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC010205.1-201ENST00000616668 449 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 AC027279.3-201ENST00000625055 122 ntBASIC0.57□□□□□ -2.32
TNFRSF9Q07011 RNU4-73P-201ENST00000363164 141 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.252-201ENST00000364556 101 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.253-201ENST00000364562 112 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 RNU6-1105P-201ENST00000384774 107 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR522-201ENST00000385071 87 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AL160004.2-201ENST00000432935 350 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AC236972.2-201ENST00000434979 310 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AC002429.1-201ENST00000437672 148 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 LINC01399-202ENST00000458450 244 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 CYCTP-201ENST00000504253 315 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 SNORA31.4-201ENST00000516049 129 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 SNORD79.1-201ENST00000516069 84 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 RNA5SP480-201ENST00000516840 109 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.702-201ENST00000516843 96 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AC133485.1-201ENST00000567176 124 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AC138907.6-201ENST00000568401 126 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR4423-201ENST00000580922 80 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR4795-201ENST00000584182 89 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR3192-201ENST00000584920 77 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 MIR4762-201ENST00000585261 75 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 DEFB117-201ENST00000602356 141 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 PRELID3BP2-201ENST00000605362 201 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 AL606534.2-204ENST00000635008 178 ntBASIC0.56□□□□□ -2.32
TNFRSF9Q07011 RNU6-1084P-201ENST00000362498 107 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.39-201ENST00000362620 98 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.143-201ENST00000363520 106 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 SNORD114-26-201ENST00000363543 72 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 U8.5-201ENST00000364528 136 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 SNORD50B-201ENST00000364995 70 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.310-201ENST00000365063 113 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.331-201ENST00000365267 102 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.336-201ENST00000365307 109 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.341-201ENST00000365341 102 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 RNU6-937P-201ENST00000384325 106 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 SNORA72-201ENST00000384339 132 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 MIR516B2-201ENST00000385190 85 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AL590004.1-201ENST00000405321 300 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms