Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
EPHB3P54753 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
EPHB3P54753 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
EPHB3P54753 Y_RNA.163-201ENST00000363702 113 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 HMGN1P7-201ENST00000491722 313 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.73□□□□□ -1.97
EPHB3P54753 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 RNU6-1149P-201ENST00000516810 97 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 SCARNA15-202ENST00000516881 127 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 AC008507.4-201ENST00000585464 127 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.73□□□□□ -1.97
EPHB3P54753 AL591926.4-201ENST00000616895 298 ntBASIC2.73□□□□□ -1.97
EPHB3P54753 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
EPHB3P54753 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
EPHB3P54753 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
EPHB3P54753 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 Y_RNA.253-201ENST00000364562 112 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 Y_RNA.332-201ENST00000365271 113 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 RNU6-756P-201ENST00000383997 107 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 MIR548A2-201ENST00000384956 97 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 AC093259.1-201ENST00000509755 300 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 AC073413.2-201ENST00000604332 360 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 RNU6-94P-201ENST00000607728 107 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 AP001318.4-201ENST00000616637 121 ntBASIC2.72□□□□□ -1.97
EPHB3P54753 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
EPHB3P54753 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
EPHB3P54753 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
EPHB3P54753 MIR340-201ENST00000362125 95 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 U8.6-201ENST00000364939 135 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 Y_RNA.323-201ENST00000365157 109 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 RNU6-546P-201ENST00000383991 107 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 Y_RNA.549-201ENST00000384657 102 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 MIR27B-201ENST00000385129 97 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 SNORD77.3-201ENST00000391113 65 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AC123900.1-201ENST00000420390 96 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
EPHB3P54753 SNORA4.4-201ENST00000515921 135 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 RNU6-1270P-201ENST00000517128 108 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 RNU7-128P-201ENST00000517247 62 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.71□□□□□ -1.98
EPHB3P54753 AC087685.1-201ENST00000587507 141 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AL356280.1-201ENST00000603614 379 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AL137067.1-201ENST00000615933 120 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
EPHB3P54753 U4.3-201ENST00000621047 82 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 CTSLP2-204ENST00000629029 392 ntBASIC2.71□□□□□ -1.98
EPHB3P54753 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
EPHB3P54753 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
EPHB3P54753 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
EPHB3P54753 SNORD73B-201ENST00000364394 72 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 Y_RNA.242-201ENST00000364473 110 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 Y_RNA.366-201ENST00000365540 102 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 MIR95-201ENST00000385072 81 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 RNU11-5P-201ENST00000391216 129 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 MIR1302-5-201ENST00000408164 150 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 RNU2-32P-201ENST00000411193 191 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
EPHB3P54753 SNRPGP10-201ENST00000432323 225 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.7□□□□□ -1.98
EPHB3P54753 TRBV12-1-201ENST00000479785 344 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 AC008413.1-201ENST00000511864 177 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 RNU7-99P-201ENST00000516271 62 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 MIR3945-201ENST00000581853 98 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.7□□□□□ -1.98
EPHB3P54753 AL590808.1-201ENST00000618696 141 ntBASIC2.7□□□□□ -1.98
EPHB3P54753 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
EPHB3P54753 AC018630.2-201ENST00000534866 2403 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
EPHB3P54753 RNU6-1014P-201ENST00000383940 103 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 SNORA51.5-201ENST00000384126 131 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 SNORA12.1-201ENST00000390873 148 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 Y_RNA.621-201ENST00000411065 96 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 AC060773.1-201ENST00000421698 310 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 SNRPGP13-201ENST00000442212 177 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 RPS26P48-201ENST00000491713 339 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 Y_RNA.666-201ENST00000516187 112 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 RNU6-1146P-201ENST00000516282 102 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 AL358944.1-201ENST00000528537 144 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 MIR5197-201ENST00000583721 112 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 AL035470.1-201ENST00000622571 220 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
EPHB3P54753 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
EPHB3P54753 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
EPHB3P54753 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EPHB3P54753 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
EPHB3P54753 Y_RNA.49-201ENST00000362714 112 ntBASIC2.68□□□□□ -1.98
EPHB3P54753 RNU6-294P-201ENST00000364999 102 ntBASIC2.68□□□□□ -1.98
EPHB3P54753 SNORA67.4-201ENST00000384688 142 ntBASIC2.68□□□□□ -1.98
EPHB3P54753 MIR518F-201ENST00000384973 87 ntBASIC2.68□□□□□ -1.98
EPHB3P54753 HMGN2P34-201ENST00000437647 269 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms