Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MIR548AR-201ENST00000582191 57 ntBASIC0.31□□□□□ -2.36
ZNF140P52738 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
ZNF140P52738 RNU4-40P-201ENST00000364351 143 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 Y_RNA.368-201ENST00000365547 113 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 RNU6-20P-201ENST00000384106 107 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 RNU6-310P-201ENST00000384655 107 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 Y_RNA.577-201ENST00000384794 101 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 SNORA75.6-201ENST00000391318 127 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 MIR1827-201ENST00000408549 66 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 RNU6-1156P-201ENST00000410365 100 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 Y_RNA.621-201ENST00000411065 96 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.3□□□□□ -2.36
ZNF140P52738 RNU7-30P-201ENST00000516835 62 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 AC005899.2-201ENST00000584353 90 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 AC011476.5-201ENST00000615594 130 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
ZNF140P52738 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.3□□□□□ -2.36
ZNF140P52738 AL589743.1-201ENST00000551932 2712 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 SNORD81.1-201ENST00000363064 77 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 RNU6-1188P-201ENST00000363795 107 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 RNA5SP48-201ENST00000363969 126 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 Y_RNA.279-201ENST00000364763 95 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 Y_RNA.310-201ENST00000365063 113 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 SNORA72-201ENST00000384339 132 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 SNORA69.1-201ENST00000390904 137 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 RNU6-613P-201ENST00000410412 108 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 AF228730.4-201ENST00000421457 183 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.29□□□□□ -2.36
ZNF140P52738 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 NDUFA4P2-201ENST00000489989 244 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 RNU11-2P-201ENST00000516898 142 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 MIR4423-201ENST00000580922 80 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 AC005972.2-201ENST00000604690 348 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 AC022306.2-201ENST00000617563 647 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 AC008133.2-201ENST00000624540 351 ntBASIC0.29□□□□□ -2.36
ZNF140P52738 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
ZNF140P52738 RNU6-626P-201ENST00000363354 107 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 Y_RNA.148-201ENST00000363557 117 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 SNORD45.3-201ENST00000363836 72 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
ZNF140P52738 Y_RNA.474-201ENST00000384341 102 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 RNU1-119P-201ENST00000391122 165 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 SNORD111-201ENST00000408139 94 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 MLLT10P1-201ENST00000418346 262 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 FCF1P4-201ENST00000448326 183 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 FGF7P6-202ENST00000451282 293 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 snoU13.21-201ENST00000459368 105 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC010655.3-201ENST00000478818 450 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC091951.2-201ENST00000500762 203 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 RNU6-155P-201ENST00000516347 100 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC022616.4-201ENST00000522985 181 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AL355375.2-201ENST00000574825 175 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC005176.2-201ENST00000596933 147 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC022441.3-201ENST00000605737 136 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 TPTEP1-208ENST00000636884 213 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 AC073869.6-201ENST00000640656 341 ntBASIC0.28□□□□□ -2.36
ZNF140P52738 RNU6-845P-201ENST00000362578 103 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 Y_RNA.166-201ENST00000363730 102 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 snoU2-30.1-201ENST00000365012 70 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 Y_RNA.329-201ENST00000365209 107 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 RNU6-1323P-201ENST00000384025 107 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 RNU6-890P-201ENST00000384121 107 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 Y_RNA.570-201ENST00000384750 101 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 MIR570-201ENST00000384917 97 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 MIR559-201ENST00000385188 96 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 AL590004.1-201ENST00000405321 300 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 MTND1P4-201ENST00000435196 415 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
ZNF140P52738 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.27□□□□□ -2.37
ZNF140P52738 MTCO3P10-201ENST00000455912 772 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.27□□□□□ -2.37
ZNF140P52738 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 PISRT1.1-201ENST00000616930 107 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 AC098679.4-201ENST00000624241 654 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 U6.92-201ENST00000636464 89 ntBASIC0.27□□□□□ -2.37
ZNF140P52738 Y_RNA.6-201ENST00000362350 114 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 Y_RNA.796-201ENST00000364268 102 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 Y_RNA.799-201ENST00000364992 102 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 RNU6-580P-201ENST00000365159 107 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 MIR15B-201ENST00000385045 98 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 SNORD105-201ENST00000386910 85 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 RNU6-131P-201ENST00000391144 107 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 AL603910.2-201ENST00000407268 136 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 MCFD2P1-201ENST00000417812 300 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 RNU7-169P-201ENST00000459456 61 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 RNU2-13P-201ENST00000515909 113 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 RNU6-830P-201ENST00000516353 107 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.26□□□□□ -2.37
ZNF140P52738 MIR548AO-201ENST00000579992 96 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 MIR4659A-201ENST00000580269 81 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 AC011712.1-201ENST00000588959 234 ntBASIC0.26□□□□□ -2.37
ZNF140P52738 AC006380.1-201ENST00000603598 186 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms