Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.75□□□□□ -2.13
NR1D1P20393 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 AC097462.1-201ENST00000514125 324 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU7-99P-201ENST00000516271 62 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
NR1D1P20393 SNORA4-201ENST00000584302 138 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 AC022513.1-201ENST00000624512 117 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 MIR411-201ENST00000362239 96 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 Y_RNA.124-201ENST00000363339 93 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU6-117P-201ENST00000365415 107 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU6-211P-201ENST00000384047 107 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU6-855P-201ENST00000410395 104 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 AL138752.1-201ENST00000452964 351 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU6-1337P-201ENST00000516525 95 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU1-142P-201ENST00000516682 145 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 RNU7-172P-201ENST00000517125 64 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 SNORA81.3-201ENST00000517283 198 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 AC027419.1-201ENST00000522976 328 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 AL008718.3-201ENST00000610217 321 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
NR1D1P20393 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
NR1D1P20393 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
NR1D1P20393 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.73□□□□□ -2.13
NR1D1P20393 Y_RNA.29-201ENST00000362570 113 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 MIR562-201ENST00000384894 95 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NR1D1P20393 RNU6-763P-201ENST00000390865 106 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 SNORA26.5-201ENST00000391215 123 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 BTF3P11-201ENST00000426582 477 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 RNU7-94P-201ENST00000459576 63 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.73□□□□□ -2.13
NR1D1P20393 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 RNU6-182P-201ENST00000516970 105 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 CBX3P4-201ENST00000538909 354 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 MIR4303-201ENST00000581299 66 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 Z83818.1-201ENST00000603584 150 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.73□□□□□ -2.13
NR1D1P20393 RNU6-862P-201ENST00000362804 105 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 Y_RNA.304-201ENST00000365011 112 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 RNU6-1323P-201ENST00000384025 107 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 SNORA72.4-201ENST00000384174 132 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 MIR548I3-201ENST00000408378 149 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 MIR548I1-201ENST00000408810 149 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 EBAG9P1-201ENST00000418955 543 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 MTND5P15-201ENST00000434246 349 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 AC069257.2-201ENST00000441819 155 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 RPS20P10-201ENST00000451209 253 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 Y_RNA.644-201ENST00000459006 113 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.72□□□□□ -2.13
NR1D1P20393 Y_RNA.674-201ENST00000516362 113 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 RNU7-116P-201ENST00000516940 62 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.72□□□□□ -2.13
NR1D1P20393 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 AC005972.2-201ENST00000604690 348 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 AC098479.1-201ENST00000609225 154 ntBASIC1.72□□□□□ -2.13
NR1D1P20393 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NR1D1P20393 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NR1D1P20393 MIR520G-201ENST00000385064 90 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 RNA5SP323-201ENST00000391094 133 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 RNA5SP467-201ENST00000391274 118 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 AL162725.1-201ENST00000435405 301 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 U8.19-201ENST00000459095 133 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 RPS26P45-201ENST00000471748 340 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 AC010409.1-201ENST00000487382 476 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.71□□□□□ -2.14
NR1D1P20393 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.71□□□□□ -2.14
NR1D1P20393 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.71□□□□□ -2.14
NR1D1P20393 AC004792.1-201ENST00000614523 137 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 AC013791.1-201ENST00000616619 62 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 AL365265.1-201ENST00000621045 234 ntBASIC1.71□□□□□ -2.14
NR1D1P20393 RNU6-653P-201ENST00000363074 106 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 RNU6-899P-201ENST00000363947 107 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 RNU6-1019P-201ENST00000364424 107 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 Y_RNA.262-201ENST00000364641 102 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 RNU6-144P-201ENST00000383951 107 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 RNU6-1186P-201ENST00000410429 97 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 Y_RNA.793-201ENST00000411222 111 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 PIGPP3-201ENST00000425307 415 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 AC099677.2-201ENST00000436385 175 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 AC024405.2-202ENST00000532731 184 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.7□□□□□ -2.14
NR1D1P20393 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
NR1D1P20393 MIR5692C2-201ENST00000577959 77 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
NR1D1P20393 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NR1D1P20393 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NR1D1P20393 RNA5SP325-201ENST00000363756 130 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 RNU6-1048P-201ENST00000364054 107 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 RNU6-42P-201ENST00000384165 107 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 SNORD116-13-201ENST00000384408 92 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 Y_RNA.555-201ENST00000384673 110 ntBASIC1.69□□□□□ -2.14
NR1D1P20393 RNU6-376P-201ENST00000384731 106 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms