Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.69□□□□□ -2.52
CXCL1P09341 MCFD2P1-201ENST00000417812 300 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.69□□□□□ -2.52
CXCL1P09341 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.69□□□□□ -2.52
CXCL1P09341 AL670379.3-201ENST00000605040 251 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 AC011921.3-201ENST00000605540 361 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 AC092807.2-201ENST00000609367 243 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 AC006157.1-201ENST00000611750 366 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 FTX_2.1-201ENST00000618816 94 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 MIR6759-201ENST00000638110 65 ntBASIC-0.69□□□□□ -2.52
CXCL1P09341 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 SNORD38B-201ENST00000384690 67 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 MIR588-201ENST00000384900 83 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 MIR518F-201ENST00000384973 87 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 MIR563-201ENST00000385080 79 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.7□□□□□ -2.52
CXCL1P09341 MTND4LP11-201ENST00000422184 280 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 EIF1P2-201ENST00000428233 350 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 MIR548AD-201ENST00000584780 82 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 MIR8066-201ENST00000617280 78 ntBASIC-0.7□□□□□ -2.52
CXCL1P09341 FGF7P2-201ENST00000332473 296 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 SNORD115-30-201ENST00000364117 82 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 RNU6-268P-201ENST00000364174 107 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 RNU4-28P-201ENST00000364739 141 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 snoU13.2-201ENST00000459201 104 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 PRDX4P1-201ENST00000507189 574 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 RNU2-60P-201ENST00000517290 128 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.71□□□□□ -2.52
CXCL1P09341 AC090616.2-202ENST00000584248 222 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 MIR4639-201ENST00000584938 69 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 AC092954.2-201ENST00000609103 430 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.71□□□□□ -2.52
CXCL1P09341 SNORD28-201ENST00000384706 75 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 MIR501-201ENST00000390204 84 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.72□□□□□ -2.52
CXCL1P09341 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 MRPS36P3-201ENST00000519284 130 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.72□□□□□ -2.52
CXCL1P09341 AC005972.2-201ENST00000604690 348 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 AC099654.12-201ENST00000639868 649 ntBASIC-0.72□□□□□ -2.52
CXCL1P09341 RNA5SP257-201ENST00000363023 116 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 RNU4-66P-201ENST00000365199 138 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 SNORA8.3-201ENST00000384679 139 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 MIR215-201ENST00000384858 110 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CXCL1P09341 MTND2P18-201ENST00000419962 1030 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 RNU6-625P-201ENST00000459412 107 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 RNA5SP285-201ENST00000516619 119 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 AC006600.1-201ENST00000572529 153 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 AC109347.2-201ENST00000610220 349 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 ZNF299P-201ENST00000406845 1804 ntBASIC-0.73□□□□□ -2.53
CXCL1P09341 MIR30D-201ENST00000362283 70 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 RNA5SP401-201ENST00000515920 127 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 RNU2-12P-201ENST00000517216 168 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 MTCO2P4-201ENST00000517968 247 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.74□□□□□ -2.53
CXCL1P09341 CR383656.4-201ENST00000546909 122 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.74□□□□□ -2.53
CXCL1P09341 MIR4752-201ENST00000579672 72 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 AP001180.6-201ENST00000584918 159 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 AC134878.1-201ENST00000619901 243 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 Z97988.1-201ENST00000637697 135 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 AC106754.1-201ENST00000562632 1513 ntBASIC-0.74□□□□□ -2.53
CXCL1P09341 MIR148A-201ENST00000362215 68 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 RNU6-595P-201ENST00000363944 107 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 RNU4-20P-201ENST00000365601 151 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 RNU6-95P-201ENST00000384697 107 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 MIR517A-201ENST00000385001 87 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 SNORD37.1-201ENST00000390968 65 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 FCF1P9-201ENST00000412546 282 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 AC236972.2-201ENST00000434979 310 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 AL138752.1-201ENST00000452964 351 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 MTND1P11-201ENST00000456661 876 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 MTND1P24-201ENST00000552175 861 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 MIR5706-201ENST00000579841 80 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 U7.6-201ENST00000610841 64 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 AP002371.2-201ENST00000624450 503 ntBASIC-0.75□□□□□ -2.53
CXCL1P09341 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.76□□□□□ -2.53
CXCL1P09341 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 SNORD49B-201ENST00000365172 72 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 RNU6-596P-201ENST00000365395 98 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 MIR196A2-201ENST00000385189 110 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.76□□□□□ -2.53
CXCL1P09341 MTATP6P13-201ENST00000438531 667 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms