Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 AC093534.1-201ENST00000504977 132 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 AL355375.2-201ENST00000574825 175 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 JPX_2.1-201ENST00000614161 69 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 MIR3688-2-201ENST00000636963 87 ntBASIC0.28□□□□□ -2.36
TRBV9A0A0B4J1U6 Y_RNA.86-201ENST00000363020 111 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-442P-201ENST00000383968 104 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-42P-201ENST00000384165 107 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 SNORA51.10-201ENST00000384418 136 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-342P-201ENST00000384521 104 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR518E-201ENST00000385252 88 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 SNORD115-47-201ENST00000391226 86 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 SNORA75.4-201ENST00000391278 119 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.592-201ENST00000410274 109 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-855P-201ENST00000410395 104 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC116353.2-201ENST00000505332 712 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC011352.1-201ENST00000512300 793 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC087685.1-201ENST00000587507 141 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 AC015726.2-201ENST00000620112 122 ntBASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
TRBV9A0A0B4J1U6 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.88-201ENST00000363029 99 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-767P-201ENST00000384132 107 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.446-201ENST00000384178 104 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR520F-201ENST00000384824 87 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR520H-201ENST00000385126 88 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 SNORD78.2-201ENST00000391076 69 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-710P-201ENST00000410424 105 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 AC092989.1-201ENST00000481235 277 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 PRDX4P1-201ENST00000507189 574 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-1012P-201ENST00000516606 109 ntBASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
TRBV9A0A0B4J1U6 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-20P-201ENST00000384106 107 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.577-201ENST00000384794 101 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 Z83846.1-201ENST00000446798 265 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-436P-201ENST00000516171 114 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU7-116P-201ENST00000516940 62 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-264P-201ENST00000517134 104 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 AP000753.3-201ENST00000604083 169 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 Pinc.1-201ENST00000616452 154 ntBASIC0.25□□□□□ -2.37
TRBV9A0A0B4J1U6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU7-4P-201ENST00000516961 62 ntBASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 EIF1P4-201ENST00000572664 335 ntBASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR6734-201ENST00000621166 68 ntBASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 AL589743.1-201ENST00000551932 2712 ntBASIC0.24□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR377-201ENST00000362145 69 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-626P-201ENST00000363354 107 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.203-201ENST00000364106 102 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.339-201ENST00000365325 102 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-1323P-201ENST00000384025 107 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.436-201ENST00000384097 102 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNY3P4-201ENST00000384428 101 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 MT-TN-201ENST00000387400 73 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 U8.17-201ENST00000391292 132 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-1156P-201ENST00000410365 100 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-1199P-201ENST00000411249 104 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 AC144568.1-201ENST00000520139 137 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 POLR3GP1-201ENST00000594073 261 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 AC087588.2-201ENST00000617667 426 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 AL669831.3-213ENST00000636676 183 ntBASIC0.23□□□□□ -2.37
TRBV9A0A0B4J1U6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.146-201ENST00000363549 102 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-934P-201ENST00000365154 107 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 SNORA1.2-201ENST00000365189 134 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR216A-201ENST00000385063 110 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MTND1P2-201ENST00000430604 821 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-470P-201ENST00000515954 104 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-830P-201ENST00000516353 107 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 RNU6-720P-201ENST00000516363 108 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR4771-2-201ENST00000577758 74 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR3612-201ENST00000579753 87 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 MIR4771-1-201ENST00000582617 74 ntBASIC0.22□□□□□ -2.37
TRBV9A0A0B4J1U6 Y_RNA.3-201ENST00000362331 103 ntBASIC0.21□□□□□ -2.38
TRBV9A0A0B4J1U6 Y_RNA.72-201ENST00000362894 103 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms