Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uspl1Q3ULM6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Gm24589-201ENSMUST00000116692 94 ntBASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Gm12497-201ENSMUST00000138778 237 ntBASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uspl1Q3ULM6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uspl1Q3ULM6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uspl1Q3ULM6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Uspl1Q3ULM6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Uspl1Q3ULM6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.64■□□□□ 0.9
Uspl1Q3ULM6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44357-201ENSMUST00000195897 142 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm19658-201ENSMUST00000196231 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44367-201ENSMUST00000196836 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44350-201ENSMUST00000197197 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44390-201ENSMUST00000197533 144 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44313-201ENSMUST00000198018 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44486-201ENSMUST00000198508 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44314-201ENSMUST00000199263 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44394-201ENSMUST00000199558 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44484-201ENSMUST00000199873 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44466-201ENSMUST00000200264 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Gm44359-201ENSMUST00000200671 138 ntBASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms