Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC137590.2-201ENST00000619709 240 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC023510.2-201ENST00000622162 746 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC013437.2-201ENST00000639587 677 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 U8.15-201ENST00000390947 134 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 RNU6-602P-201ENST00000411155 105 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 SNORD22.1-201ENST00000516331 125 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 AP003072.1-201ENST00000531740 145 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 Z94722.1-201ENST00000604328 474 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 MIR8066-201ENST00000617280 78 ntBASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.5□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 RNU4-66P-201ENST00000365199 138 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 RNU6-431P-201ENST00000383874 107 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AL590002.1-201ENST00000406554 418 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 RNU4-83P-201ENST00000410863 133 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 MTCO1P27-201ENST00000448269 226 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 RNU6-175P-201ENST00000516896 107 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AC104072.1-201ENST00000568817 668 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 MIR4491-201ENST00000581087 68 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AC012409.4-201ENST00000612923 249 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AP002782.1-201ENST00000623107 614 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 MTND5P17-201ENST00000418405 1603 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 AL596211.1-201ENST00000569873 2277 ntBASIC-1.51□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 SNORD50B-201ENST00000364995 70 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 SNORA24-201ENST00000384096 131 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AL590623.1-201ENST00000427864 105 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MTND1P32-201ENST00000433043 938 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AL359672.1-201ENST00000442302 409 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MTND4P18-201ENST00000447010 465 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AP000533.3-201ENST00000447704 118 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AP000542.1-201ENST00000448473 371 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AC022137.1-201ENST00000483735 151 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 RNU6-150P-201ENST00000516237 95 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AC068587.4-201ENST00000533893 186 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MIR4789-201ENST00000577469 82 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 RNU6-86P-201ENST00000606534 107 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 RNU6-784P-201ENST00000384330 106 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MIR588-201ENST00000384900 83 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MTCYBP4-201ENST00000401524 249 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 HMGN2P32-201ENST00000444648 269 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 FCF1P4-201ENST00000448326 183 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AC079140.5-201ENST00000507882 310 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AL356055.1-201ENST00000602528 446 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 AC004223.4-201ENST00000612426 332 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.52□□□□□ -2.65
SCN11AQ9UI33 MIR30D-201ENST00000362283 70 ntBASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 MIR517B-201ENST00000385102 67 ntBASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 AC131281.1-201ENST00000522984 164 ntBASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.53□□□□□ -2.65
SCN11AQ9UI33 RNU6-865P-201ENST00000364772 107 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 MIR522-201ENST00000385071 87 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 MTND3P8-201ENST00000412909 339 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 MTND4P3-201ENST00000417829 541 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 HLA-S-202ENST00000425174 53 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 SEPT14P24-201ENST00000447236 180 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 DEFB131E-201ENST00000532329 154 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 AL391834.2-201ENST00000609982 546 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 RNU6-119P-201ENST00000364882 107 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 SNORD24-201ENST00000383884 75 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 U6.112-201ENST00000384129 70 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 MIR5591-201ENST00000578248 65 ntBASIC-1.54□□□□□ -2.66
SCN11AQ9UI33 RNY4P7-201ENST00000364600 96 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 RNU6-190P-201ENST00000384154 102 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 RNU6-481P-201ENST00000384194 107 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 MIR147A-201ENST00000385079 72 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 MTCO2P6-201ENST00000463134 685 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 AC026421.1-201ENST00000519101 163 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 HIF1AP1-201ENST00000553642 175 ntBASIC-1.55□□□□□ -2.66
SCN11AQ9UI33 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 SNORD114-7-201ENST00000362520 77 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNU6-354P-201ENST00000383862 107 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNU6-610P-201ENST00000384264 107 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNA5SP180-201ENST00000516181 101 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 RNY4P37-201ENST00000516225 96 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 BNIP3P40-201ENST00000596017 556 ntBASIC-1.56□□□□□ -2.66
SCN11AQ9UI33 AC005776.1-201ENST00000603164 290 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms