Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC233266.1-201ENST00000454518 96 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AL133373.1-201ENST00000497098 94 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-436P-201ENST00000516171 114 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.702-201ENST00000516843 96 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORD116.3-201ENST00000517176 78 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AC006600.1-201ENST00000572529 153 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR4423-201ENST00000580922 80 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AL117336.2-201ENST00000602435 335 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AC242852.1-201ENST00000612151 96 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AC244015.1-201ENST00000622301 99 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 AC112487.2-201ENST00000637950 304 ntBASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.5-201ENST00000362334 102 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.146-201ENST00000363549 102 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.252-201ENST00000364556 101 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-155P-201ENST00000516347 100 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU4-77P-201ENST00000516692 156 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 GHRLOS.1-201ENST00000610995 70 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 AC010205.1-201ENST00000616668 449 ntBASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42EP4Q9H3Q1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.58-201ENST00000362807 102 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.154-201ENST00000363624 102 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNY3P1-201ENST00000365085 102 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.315-201ENST00000365117 102 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU1-115P-201ENST00000365329 160 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORA2.2-201ENST00000365473 135 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.356-201ENST00000365475 113 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNY3-201ENST00000365484 102 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.570-201ENST00000384750 101 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR598-201ENST00000384868 97 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU7-12P-201ENST00000516030 62 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-1116P-201ENST00000517269 99 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 AC004832.4-201ENST00000608952 331 ntBASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.86□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-833P-201ENST00000363486 107 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 U8.5-201ENST00000364528 136 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORA25.10-201ENST00000515926 124 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RN7SKP295-201ENST00000517264 153 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR5188-201ENST00000583467 113 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR4762-201ENST00000585261 75 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 AC092447.9-201ENST00000603395 144 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 LARP7P1-201ENST00000605576 316 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORD58B-201ENST00000607313 66 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 AC027335.2-201ENST00000624030 375 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 AC027279.3-201ENST00000625055 122 ntBASIC0.85□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-324P-201ENST00000363957 106 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-1175P-201ENST00000365200 107 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.458-201ENST00000384240 102 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-342P-201ENST00000384521 104 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 MCFD2P1-201ENST00000417812 300 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AC236972.2-201ENST00000434979 310 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 MTND3P22-201ENST00000510932 243 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 RNU6-976P-201ENST00000516086 111 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 SNORA40.14-201ENST00000516543 86 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AC120024.3-201ENST00000603167 156 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 AL606534.2-204ENST00000635008 178 ntBASIC0.84□□□□□ -2.27
CDC42EP4Q9H3Q1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD81.1-201ENST00000363064 77 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORD114-26-201ENST00000363543 72 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.329-201ENST00000365209 107 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 Y_RNA.462-201ENST00000384268 102 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 MIR891A-201ENST00000401237 79 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AL451046.2-201ENST00000403074 277 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AC005042.3-201ENST00000453230 174 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 CYCTP-201ENST00000504253 315 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 RNU6-322P-201ENST00000516010 103 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AL138825.1-201ENST00000618587 192 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42EP4Q9H3Q1 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms