Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.73□□□□□ -2.13
USP44Q9H0E7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.73□□□□□ -2.13
USP44Q9H0E7 AL117187.1-201ENST00000555482 181 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 AC091178.2-201ENST00000584401 117 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 MIR424-201ENST00000362227 98 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNU6-238P-201ENST00000363313 106 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNU6-136P-201ENST00000384663 107 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNU6-1248P-201ENST00000391096 64 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNA5SP511-201ENST00000410487 115 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 AL358176.2-201ENST00000425769 204 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNU7-34P-201ENST00000459394 64 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 AC091021.1-201ENST00000468051 388 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 HMGN1P10-201ENST00000474557 553 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 PRR13P7-201ENST00000605538 430 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 AL513423.1-201ENST00000621695 132 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 AC100821.1-201ENST00000523153 2479 ntBASIC1.72□□□□□ -2.13
USP44Q9H0E7 RNU4-80P-201ENST00000363200 141 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RNU6-439P-201ENST00000384188 106 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RNA5SP482-201ENST00000391269 118 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 AL162725.1-201ENST00000435405 301 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 AL135790.2-201ENST00000437701 267 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 AC108729.3-201ENST00000513484 108 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RNU6-1045P-201ENST00000516321 107 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 SNORA31.10-201ENST00000516482 106 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 RNU2-56P-201ENST00000516826 190 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
USP44Q9H0E7 AC008269.2-201ENST00000561915 1105 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 AC004832.4-201ENST00000608952 331 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.71□□□□□ -2.14
USP44Q9H0E7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
USP44Q9H0E7 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 Y_RNA.16-201ENST00000362421 102 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 Y_RNA.84-201ENST00000363011 104 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 Y_RNA.310-201ENST00000365063 113 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 RNU6-290P-201ENST00000365212 101 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 Y_RNA.574-201ENST00000384766 95 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 RNU6-855P-201ENST00000410395 104 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 AC073349.3-201ENST00000617616 186 ntBASIC1.7□□□□□ -2.14
USP44Q9H0E7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
USP44Q9H0E7 RNU6-1309P-201ENST00000363305 108 ntBASIC1.69□□□□□ -2.14
USP44Q9H0E7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.69□□□□□ -2.14
USP44Q9H0E7 RPS20P10-201ENST00000451209 253 ntBASIC1.69□□□□□ -2.14
USP44Q9H0E7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.69□□□□□ -2.14
USP44Q9H0E7 RNU6-191P-201ENST00000516295 94 ntBASIC1.69□□□□□ -2.14
USP44Q9H0E7 RNU6-570P-201ENST00000517051 105 ntBASIC1.69□□□□□ -2.14
USP44Q9H0E7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.69□□□□□ -2.14
USP44Q9H0E7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USP44Q9H0E7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.68□□□□□ -2.14
USP44Q9H0E7 Y_RNA.133-201ENST00000363428 110 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 Y_RNA.341-201ENST00000365341 102 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 Y_RNA.368-201ENST00000365547 113 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 Y_RNA.376-201ENST00000365638 108 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 RNU6-1203P-201ENST00000410703 110 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.68□□□□□ -2.14
USP44Q9H0E7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
USP44Q9H0E7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.68□□□□□ -2.14
USP44Q9H0E7 MTCO1P5-201ENST00000433573 344 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 HSPE1P24-201ENST00000450782 238 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 AC004223.1-201ENST00000479840 271 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 AC015688.6-201ENST00000577737 104 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
USP44Q9H0E7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
USP44Q9H0E7 Y_RNA.47-201ENST00000362697 108 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 Y_RNA.176-201ENST00000363815 109 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 SNORA12.1-201ENST00000390873 148 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 RPS4XP11-201ENST00000446897 772 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 AC009474.2-201ENST00000451383 136 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 MTND4LP30-201ENST00000454092 297 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.67□□□□□ -2.14
USP44Q9H0E7 AC068338.1-201ENST00000565567 176 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 MIR3660-201ENST00000584845 100 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 MIR8062-201ENST00000621515 85 ntBASIC1.67□□□□□ -2.14
USP44Q9H0E7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.67□□□□□ -2.14
USP44Q9H0E7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP44Q9H0E7 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 RNU6-713P-201ENST00000384761 107 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 MT-TW-201ENST00000387382 68 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
USP44Q9H0E7 AC099513.1-201ENST00000490423 301 ntBASIC1.66□□□□□ -2.14
USP44Q9H0E7 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms