Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC006461.1-201ENST00000412637 326 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 AC099799.1-201ENST00000439809 192 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 RNU6-277P-201ENST00000516272 106 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 RNU6-911P-201ENST00000516523 104 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 AC022616.4-201ENST00000522985 181 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 AC005176.2-201ENST00000596933 147 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 AC136443.5-201ENST00000603741 370 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 MTND4LP32-201ENST00000636111 270 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
VMP1Q96GC9 Y_RNA.226-201ENST00000364337 114 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 Y_RNA.259-201ENST00000364619 101 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 RNU6-1283P-201ENST00000365314 105 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 RNU6-20P-201ENST00000384106 107 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 SNORD116-29-201ENST00000384516 83 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 MIR520C-201ENST00000385005 87 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 MIR628-201ENST00000385229 95 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.88□□□□□ -2.27
VMP1Q96GC9 SNORA74.3-201ENST00000517108 154 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 AC138305.3-201ENST00000624988 240 ntBASIC0.88□□□□□ -2.27
VMP1Q96GC9 MIR103A2-201ENST00000362154 78 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 RNU6-1084P-201ENST00000362498 107 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 RNU6-626P-201ENST00000363354 107 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 MIR516B2-201ENST00000385190 85 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 MIR100-201ENST00000385259 80 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 RNY4P36-201ENST00000391116 96 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 RNA5SP247-201ENST00000411181 105 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 MLLT10P1-201ENST00000418346 262 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.87□□□□□ -2.27
VMP1Q96GC9 MIR4659A-201ENST00000580269 81 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 UBE2V2P2-201ENST00000587677 504 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 AC011476.5-201ENST00000615594 130 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 MIR1302-1-201ENST00000637932 143 ntBASIC0.87□□□□□ -2.27
VMP1Q96GC9 SNORD114-22-201ENST00000365423 72 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 AC117470.1-201ENST00000381974 330 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 Y_RNA.384-201ENST00000383909 102 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 RNU6-1040P-201ENST00000383974 107 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 Y_RNA.446-201ENST00000384178 104 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 MIR1287-201ENST00000408492 90 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 RNU2-61P-201ENST00000411069 191 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 RNU6-1199P-201ENST00000411249 104 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 RNU6-155P-201ENST00000516347 100 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 RNU6-699P-201ENST00000517081 110 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 Y_RNA.718-201ENST00000517110 102 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 MIR4452-201ENST00000583004 71 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 AC005730.3-201ENST00000583067 366 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 SEPT14P17-201ENST00000617978 177 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
VMP1Q96GC9 Y_RNA.27-201ENST00000362540 103 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 RNU6-324P-201ENST00000363957 106 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 Y_RNA.230-201ENST00000364348 109 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 SNORD14.1-201ENST00000365609 90 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 RNU6-708P-201ENST00000384217 107 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 MIR15B-201ENST00000385045 98 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 MIR522-201ENST00000385071 87 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 AC096644.2-201ENST00000429278 159 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 CHEK2P4-201ENST00000450340 246 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 SNORD45.4-201ENST00000516629 73 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 AL132765.2-201ENST00000610812 351 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 U6.92-201ENST00000636464 89 ntBASIC0.85□□□□□ -2.27
VMP1Q96GC9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 MIR605-201ENST00000385078 83 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.84□□□□□ -2.27
VMP1Q96GC9 RNU6-436P-201ENST00000516171 114 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 RNU6-966P-201ENST00000516479 104 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 AP003716.2-201ENST00000528260 108 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 VN1R91P-201ENST00000594377 169 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.84□□□□□ -2.27
VMP1Q96GC9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
VMP1Q96GC9 SNORA25.3-201ENST00000363205 127 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 SNORA72.1-201ENST00000363485 129 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 Y_RNA.146-201ENST00000363549 102 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 Y_RNA.463-201ENST00000384271 102 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 SNORA25.10-201ENST00000515926 124 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 SNORA18.7-201ENST00000516910 131 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 Y_RNA.714-201ENST00000517065 90 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC023827.1-201ENST00000569247 97 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC006600.1-201ENST00000572529 153 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 MIR4764-201ENST00000580680 88 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC131055.1-201ENST00000584626 316 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC005972.2-201ENST00000604690 348 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AL353765.1-201ENST00000605514 183 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC022441.3-201ENST00000605737 136 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 AC104465.1-201ENST00000611365 139 ntBASIC0.83□□□□□ -2.28
VMP1Q96GC9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 snoU2-30.1-201ENST00000365012 70 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 Y_RNA.428-201ENST00000384078 102 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 MTCO2P27-201ENST00000420740 428 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 AL035398.1-201ENST00000430869 322 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
VMP1Q96GC9 RNU7-152P-201ENST00000458982 64 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 RNU7-41P-201ENST00000515917 61 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 RNU7-43P-201ENST00000516554 64 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms