Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 AL021368.2-201ENST00000606125 5352 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 RNU6-1209P-201ENST00000363655 107 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.796-201ENST00000364268 102 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.799-201ENST00000364992 102 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 RNU2-48P-201ENST00000410694 191 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 AC007064.1-201ENST00000412238 351 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 COX6CP6-201ENST00000490840 228 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 AC096725.1-201ENST00000514266 313 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 RNU6-65P-201ENST00000516332 98 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 RNU6-856P-201ENST00000516959 98 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 MIR4438-201ENST00000585271 93 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 AL365205.2-201ENST00000594586 68 ntBASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM40Q8WWA1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 RNU6-228P-201ENST00000362700 106 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.66-201ENST00000362862 102 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 RNU6-1134P-201ENST00000365156 101 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 PGBD4P5-201ENST00000445958 426 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 AC023449.1-201ENST00000454464 154 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM40Q8WWA1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 RNA5SP126-201ENST00000365092 109 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 RNU6-117P-201ENST00000365415 107 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 Y_RNA.362-201ENST00000365518 110 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 RNU6-1124P-201ENST00000384169 107 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 MIR592-201ENST00000384959 97 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 SNORA26-201ENST00000391286 122 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AC063976.3-201ENST00000426849 329 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AC245102.2-201ENST00000448956 180 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AC097462.1-201ENST00000514125 324 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AC026421.1-201ENST00000519101 163 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 MIR5009-201ENST00000578736 100 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 AL590808.1-201ENST00000618696 141 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM40Q8WWA1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 RNU1-22P-201ENST00000363334 158 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 AL117342.1-201ENST00000404861 406 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 RPS29P21-201ENST00000496272 170 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 OR9P1P-201ENST00000496431 281 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 AC011406.1-201ENST00000512440 370 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 RNU7-172P-201ENST00000517125 64 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 AC141557.1-201ENST00000540982 400 ntBASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.07□□□□□ -1.92
TMEM40Q8WWA1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 Y_RNA.342-201ENST00000365352 113 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 SNORA25B-201ENST00000365507 128 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 HMGN2P34-201ENST00000437647 269 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 AC107297.1-201ENST00000459991 176 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 AC018868.1-201ENST00000491307 315 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 RNU6-1149P-201ENST00000516810 97 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 AC068339.1-201ENST00000526965 141 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 ZNF720P1-201ENST00000562403 1939 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 MIR2681-201ENST00000581814 105 ntBASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
TMEM40Q8WWA1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RNU6-414P-201ENST00000363705 104 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 MIR562-201ENST00000384894 95 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 MT-TI-201ENST00000387365 69 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 MIR1255A-201ENST00000408338 113 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RPS4XP11-201ENST00000446897 772 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RN7SL429P-201ENST00000479090 223 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RN7SL489P-201ENST00000486185 223 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RN7SL327P-201ENST00000488659 223 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RNU6-240P-201ENST00000516098 97 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 U2.20-201ENST00000613956 192 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 RN7SL853P-201ENST00000617250 223 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.05□□□□□ -1.92
TMEM40Q8WWA1 Y_RNA.818-201ENST00000618813 71 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms