Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RNU6-370P-201ENST00000411008 104 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 SEPT14P24-201ENST00000447236 180 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 MTCO1P27-201ENST00000448269 226 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 RNY4P37-201ENST00000516225 96 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 MTND5P34-201ENST00000568888 325 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 MIR6851-201ENST00000617060 67 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 AC137590.2-201ENST00000619709 240 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 RNU6-926P-201ENST00000384075 107 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 MT-TF-201ENST00000387314 71 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 RNU4-83P-201ENST00000410863 133 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AL359672.1-201ENST00000442302 409 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 snoU13.6-201ENST00000458785 104 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 SNORA25.13-201ENST00000516395 103 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AC068587.4-201ENST00000533893 186 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AL133255.1-201ENST00000606374 441 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AC012409.4-201ENST00000612923 249 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 AC013437.2-201ENST00000639587 677 ntBASIC-1.87□□□□□ -2.71
CFAP43Q8NDM7 RNU6-502P-201ENST00000362419 108 ntBASIC-1.88□□□□□ -2.71
CFAP43Q8NDM7 MIR517B-201ENST00000385102 67 ntBASIC-1.88□□□□□ -2.71
CFAP43Q8NDM7 RNU6-323P-201ENST00000521915 107 ntBASIC-1.88□□□□□ -2.71
CFAP43Q8NDM7 RNU6-86P-201ENST00000606534 107 ntBASIC-1.88□□□□□ -2.71
CFAP43Q8NDM7 SNORD11B-201ENST00000607707 90 ntBASIC-1.88□□□□□ -2.71
CFAP43Q8NDM7 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 SNORD50B-201ENST00000364995 70 ntBASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 RNU6-847P-201ENST00000411115 108 ntBASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 RNA5SP54-201ENST00000516951 92 ntBASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 AF250324.2-201ENST00000608299 610 ntBASIC-1.89□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 MIR9-2-201ENST00000384838 87 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 RNY4P36-201ENST00000391116 96 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 MTND4P3-201ENST00000417829 541 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 AL445193.1-201ENST00000441183 141 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 FCF1P4-201ENST00000448326 183 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 MIR8055-201ENST00000610739 97 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 RNU6-136P-201ENST00000384663 107 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 CALM2P2-201ENST00000428512 440 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 UQCRBP2-201ENST00000447827 297 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 USP9YP12-201ENST00000450481 570 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 GMFBP1-201ENST00000467831 427 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 AF186996.7-201ENST00000492781 209 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 MIR6082-201ENST00000613604 109 ntBASIC-1.9□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 RNU6-609P-201ENST00000365459 107 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 MIR181B2-201ENST00000385004 89 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 U8.15-201ENST00000390947 134 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 AC134698.4-201ENST00000523451 826 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 AC072039.2-201ENST00000608883 439 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 MIR8066-201ENST00000617280 78 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 AC008873.1-201ENST00000625051 138 ntBASIC-1.91□□□□□ -2.72
CFAP43Q8NDM7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 RNU6-324P-201ENST00000363957 106 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 RNU6-900P-201ENST00000384498 102 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 MIR588-201ENST00000384900 83 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 RNA5SP494-201ENST00000410653 129 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 MTND4P18-201ENST00000447010 465 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC022137.1-201ENST00000483735 151 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC073648.5-201ENST00000603502 305 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 MIR6129-201ENST00000616087 109 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 AC068137.4-201ENST00000638485 296 ntBASIC-1.92□□□□□ -2.72
CFAP43Q8NDM7 SNORD87-201ENST00000364849 89 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 RNU6-245P-201ENST00000384020 107 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 AL354950.2-201ENST00000617939 290 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 AC126544.2-201ENST00000625174 749 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 RNU4-28P-201ENST00000364739 141 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 AP000533.3-201ENST00000447704 118 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 RNU2-13P-201ENST00000515909 113 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 MIR4491-201ENST00000581087 68 ntBASIC-1.93□□□□□ -2.72
CFAP43Q8NDM7 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 SNORD74.6-201ENST00000364796 70 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 RNU6-407P-201ENST00000365280 104 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 RNU6-784P-201ENST00000384330 106 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 SNORD56B-201ENST00000384713 71 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 MIR487A-201ENST00000385009 80 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 MTATP6P17-201ENST00000431030 672 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 snoU83B.1-201ENST00000517136 88 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 MIR4423-201ENST00000580922 80 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 AC073539.2-201ENST00000597113 165 ntBASIC-1.94□□□□□ -2.72
CFAP43Q8NDM7 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 1218.7 ms