Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PSEN1P49768 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.27□□□□□ -1.73
PSEN1P49768 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PSEN1P49768 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
PSEN1P49768 RNU1-18P-201ENST00000363062 164 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PSEN1P49768 MIR548G-201ENST00000408442 89 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 AL117339.2-201ENST00000430475 180 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.26□□□□□ -1.73
PSEN1P49768 RPS29P29-201ENST00000456396 171 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 AC018868.1-201ENST00000491307 315 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 AC023141.11-201ENST00000508864 202 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 MIR4286-201ENST00000580651 93 ntBASIC4.26□□□□□ -1.73
PSEN1P49768 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PSEN1P49768 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PSEN1P49768 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PSEN1P49768 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PSEN1P49768 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PSEN1P49768 RNA5SP139-201ENST00000364340 117 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 MIR206-201ENST00000384872 86 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PSEN1P49768 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.25□□□□□ -1.73
PSEN1P49768 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.25□□□□□ -1.73
PSEN1P49768 AC090255.1-201ENST00000495779 349 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.25□□□□□ -1.73
PSEN1P49768 RNU6-90P-201ENST00000606352 106 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 MIR4791-201ENST00000607666 84 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 U4atac.1-201ENST00000618345 95 ntBASIC4.25□□□□□ -1.73
PSEN1P49768 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.25□□□□□ -1.73
PSEN1P49768 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PSEN1P49768 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.25□□□□□ -1.73
PSEN1P49768 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PSEN1P49768 AC093831.2-201ENST00000624393 3427 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.24□□□□□ -1.73
PSEN1P49768 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.24□□□□□ -1.73
PSEN1P49768 MAPK10-362ENST00000641864 4484 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 RNU6-1072P-201ENST00000384703 107 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 RNU6-443P-201ENST00000384780 107 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 MIR34C-201ENST00000384831 77 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 RNU6-613P-201ENST00000410412 108 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
PSEN1P49768 RNU6-826P-201ENST00000516827 104 ntBASIC4.24□□□□□ -1.73
PSEN1P49768 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PSEN1P49768 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PSEN1P49768 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PSEN1P49768 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PSEN1P49768 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PSEN1P49768 MIR372-201ENST00000362225 67 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 SNORD35B-201ENST00000363660 87 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 RNA5SP283-201ENST00000365604 119 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 RNU6-1190P-201ENST00000410811 104 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 RNU1-98P-201ENST00000458992 160 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PSEN1P49768 SEM1P1-201ENST00000506694 209 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 MIR6868-201ENST00000611215 58 ntBASIC4.23□□□□□ -1.73
PSEN1P49768 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PSEN1P49768 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PSEN1P49768 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PSEN1P49768 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PSEN1P49768 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PSEN1P49768 RNU6-833P-201ENST00000363486 107 ntBASIC4.22□□□□□ -1.73
PSEN1P49768 RNU6-1307P-201ENST00000391012 103 ntBASIC4.22□□□□□ -1.73
PSEN1P49768 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.22□□□□□ -1.73
PSEN1P49768 AL020996.3-201ENST00000606617 222 ntBASIC4.22□□□□□ -1.73
PSEN1P49768 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PSEN1P49768 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PSEN1P49768 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PSEN1P49768 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PSEN1P49768 SNORA68.1-201ENST00000364537 132 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 SNORA24-201ENST00000384096 131 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 MIR1251-201ENST00000408552 70 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 RN7SKP111-201ENST00000410349 271 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 RNU7-73P-201ENST00000458743 63 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 MIR4474-201ENST00000579189 78 ntBASIC4.21□□□□□ -1.74
PSEN1P49768 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.21□□□□□ -1.74
PSEN1P49768 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC4.21□□□□□ -1.74
PSEN1P49768 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PSEN1P49768 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PSEN1P49768 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PSEN1P49768 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PSEN1P49768 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PSEN1P49768 SNORA25B-201ENST00000365507 128 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 SNORA26.7-201ENST00000391288 122 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.2□□□□□ -1.74
PSEN1P49768 SPINT5P-201ENST00000448174 155 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 AL049873.1-201ENST00000480540 376 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 AC006483.1-201ENST00000487308 313 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.2□□□□□ -1.74
PSEN1P49768 AL513043.2-201ENST00000573941 143 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 AC007336.1-201ENST00000576365 3828 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 AL606490.9-201ENST00000603331 271 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 MIR6500-201ENST00000622700 86 ntBASIC4.2□□□□□ -1.74
PSEN1P49768 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PSEN1P49768 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PSEN1P49768 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.19□□□□□ -1.74
PSEN1P49768 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PSEN1P49768 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PSEN1P49768 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PSEN1P49768 RNA5SP493-201ENST00000364115 91 ntBASIC4.19□□□□□ -1.74
PSEN1P49768 RNU6-865P-201ENST00000364772 107 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms