Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SNORA44.1-201ENST00000517031 108 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 AC130289.1-201ENST00000577321 73 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 MIR5692C2-201ENST00000577959 77 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 AC013791.1-201ENST00000616619 62 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 AC022513.1-201ENST00000624512 117 ntBASIC2.08□□□□□ -2.08
HOXD12P35452 RNU6-899P-201ENST00000363947 107 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 RNU6-200P-201ENST00000364743 107 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 U8.7-201ENST00000364940 136 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 Y_RNA.626-201ENST00000411288 95 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 CST2P1-201ENST00000425770 87 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXD12P35452 RPL36AP21-201ENST00000490372 323 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXD12P35452 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXD12P35452 RNU6-138P-201ENST00000515952 107 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 AC015720.1-201ENST00000565251 277 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 AC022254.1-201ENST00000567857 235 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 AC073413.2-201ENST00000604332 360 ntBASIC2.07□□□□□ -2.08
HOXD12P35452 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HOXD12P35452 Y_RNA.83-201ENST00000363005 113 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 RNU6-907P-201ENST00000390924 102 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 AL162725.1-201ENST00000435405 301 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXD12P35452 RNVU1-2-201ENST00000516326 135 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXD12P35452 MIR4498-201ENST00000577599 66 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 POLR3GP1-201ENST00000594073 261 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 AC011921.3-201ENST00000605540 361 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXD12P35452 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 U6.108-201ENST00000637764 58 ntBASIC2.06□□□□□ -2.08
HOXD12P35452 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HOXD12P35452 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXD12P35452 Y_RNA.274-201ENST00000364714 101 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 Y_RNA.293-201ENST00000364908 93 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 RNU6-1323P-201ENST00000384025 107 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 AC108729.3-201ENST00000513484 108 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 RNU7-115P-201ENST00000516433 55 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 RNU7-128P-201ENST00000517247 62 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 AC024405.2-202ENST00000532731 184 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXD12P35452 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXD12P35452 AP003357.1-201ENST00000604497 148 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 MIR548AY-201ENST00000617669 107 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
HOXD12P35452 Y_RNA.4-201ENST00000362333 112 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 RNU6-1205P-201ENST00000363625 106 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 Y_RNA.297-201ENST00000364950 91 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 Y_RNA.304-201ENST00000365011 112 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 MTND5P15-201ENST00000434246 349 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 COX6CP14-201ENST00000469580 174 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 AL163195.1-201ENST00000496941 348 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXD12P35452 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXD12P35452 RNY3P16-201ENST00000516338 101 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 RNU7-116P-201ENST00000516940 62 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 MIR5094-201ENST00000578766 85 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 WWP1P1-201ENST00000466609 2769 ntBASIC2.04□□□□□ -2.08
HOXD12P35452 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HOXD12P35452 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HOXD12P35452 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HOXD12P35452 MIR411-201ENST00000362239 96 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 Y_RNA.262-201ENST00000364641 102 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 RNU11-5P-201ENST00000391216 129 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 SNORA36B-201ENST00000410438 131 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 RPS4XP11-201ENST00000446897 772 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXD12P35452 RPL23AP54-201ENST00000495129 419 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 AC068700.1-201ENST00000565862 3754 ntBASIC2.03□□□□□ -2.08
HOXD12P35452 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXD12P35452 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXD12P35452 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXD12P35452 Y_RNA.308-201ENST00000365043 101 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 RNU6-144P-201ENST00000383951 107 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 RNA5SP100-201ENST00000410903 110 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 RNA5SP59-201ENST00000410922 110 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 AC091021.1-201ENST00000468051 388 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXD12P35452 RNU6-1053P-201ENST00000515930 101 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.02□□□□□ -2.09
HOXD12P35452 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXD12P35452 AC018630.2-201ENST00000534866 2403 ntBASIC2.01□□□□□ -2.09
HOXD12P35452 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXD12P35452 RNU4-10P-201ENST00000364383 140 ntBASIC2.01□□□□□ -2.09
HOXD12P35452 RNU6-923P-201ENST00000364753 107 ntBASIC2.01□□□□□ -2.09
HOXD12P35452 SNORA72-201ENST00000384339 132 ntBASIC2.01□□□□□ -2.09
HOXD12P35452 AL138752.1-201ENST00000452964 351 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms