Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 POLR3GP1-201ENST00000594073 261 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 AC120024.3-201ENST00000603167 156 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 AC037487.3-201ENST00000606668 112 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 AL591926.4-201ENST00000616895 298 ntBASIC1.56□□□□□ -2.16
ABCD3P28288 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
ABCD3P28288 RNU6-833P-201ENST00000363486 107 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 Y_RNA.253-201ENST00000364562 112 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 RNU6-102P-201ENST00000384485 104 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 SNORA53-201ENST00000391141 249 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 MIR891A-201ENST00000401237 79 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCD3P28288 ELOCP20-201ENST00000422460 345 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 AL135790.2-201ENST00000437701 267 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 LINC01399-202ENST00000458450 244 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 RNU7-115P-201ENST00000516433 55 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 Y_RNA.714-201ENST00000517065 90 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCD3P28288 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 MIR548AY-201ENST00000617669 107 ntBASIC1.55□□□□□ -2.16
ABCD3P28288 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ABCD3P28288 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
ABCD3P28288 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCD3P28288 SNORA63-201ENST00000363450 132 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 Y_RNA.153-201ENST00000363615 91 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCD3P28288 Y_RNA.418-201ENST00000384029 102 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 RNU6-121P-201ENST00000410525 99 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 AC104332.1-201ENST00000440471 797 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 AL731563.1-201ENST00000442202 214 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 HMGN1P7-201ENST00000491722 313 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 MRPS35P2-201ENST00000508242 191 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 RNU6-322P-201ENST00000516010 103 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 RNU6-191P-201ENST00000516295 94 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 RNU6-1137P-201ENST00000517073 99 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCD3P28288 AC024405.2-202ENST00000532731 184 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCD3P28288 AC127455.1-201ENST00000565496 145 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
ABCD3P28288 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCD3P28288 Y_RNA.105-201ENST00000363182 111 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 RNU6-163P-201ENST00000384396 106 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 MIR653-201ENST00000385279 96 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ABCD3P28288 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 AP003072.1-201ENST00000531740 145 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 AL512310.8-201ENST00000550183 120 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 AC006504.6-201ENST00000590142 199 ntBASIC1.53□□□□□ -2.16
ABCD3P28288 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCD3P28288 SNORA72.4-201ENST00000384174 132 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 AL603825.1-201ENST00000438481 80 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 RPL23AP54-201ENST00000495129 419 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 RNU2-31P-201ENST00000516954 155 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 AP003733.2-201ENST00000529409 171 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 AC090049.2-201ENST00000550377 109 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 AC106754.2-201ENST00000623006 233 ntBASIC1.52□□□□□ -2.17
ABCD3P28288 SNORA25.1-201ENST00000362326 128 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 RNU6-326P-201ENST00000365480 107 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 RNU6-514P-201ENST00000384208 107 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 RNU6-1011P-201ENST00000384668 107 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 MIR522-201ENST00000385071 87 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCD3P28288 MTCO1P5-201ENST00000433573 344 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 AC117454.1-201ENST00000491120 168 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 AL161670.1-201ENST00000554348 137 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 AC007742.2-201ENST00000618226 398 ntBASIC1.51□□□□□ -2.17
ABCD3P28288 snoU2_19.2-201ENST00000363024 80 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.203-201ENST00000364106 102 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 U8.7-201ENST00000364940 136 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.326-201ENST00000365176 113 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 RNU6-131P-201ENST00000391144 107 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCD3P28288 AC093850.1-201ENST00000454121 251 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 MIR2681-201ENST00000581814 105 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 AL512605.2-201ENST00000592972 256 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.812-201ENST00000610788 101 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.784-201ENST00000613803 101 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 JPX_2.1-201ENST00000614161 69 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.787-201ENST00000616522 101 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.780-201ENST00000617336 101 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 Y_RNA.801-201ENST00000619005 101 ntBASIC1.5□□□□□ -2.17
ABCD3P28288 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
ABCD3P28288 Y_RNA.140-201ENST00000363474 103 ntBASIC1.49□□□□□ -2.17
ABCD3P28288 RNU6-899P-201ENST00000363947 107 ntBASIC1.49□□□□□ -2.17
ABCD3P28288 RNU6-801P-201ENST00000364087 105 ntBASIC1.49□□□□□ -2.17
ABCD3P28288 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms