Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 Y_RNA.310-201ENST00000365063 113 ntBASIC1.43□□□□□ -2.18
CHMP24386 Y_RNA.368-201ENST00000365547 113 ntBASIC1.43□□□□□ -2.18
CHMP24386 MIR653-201ENST00000385279 96 ntBASIC1.43□□□□□ -2.18
CHMP24386 MIR548P-201ENST00000408336 84 ntBASIC1.43□□□□□ -2.18
CHMP24386 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
CHMP24386 AC010655.3-201ENST00000478818 450 ntBASIC1.43□□□□□ -2.18
CHMP24386 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
CHMP24386 Y_RNA.721-201ENST00000517207 102 ntBASIC1.43□□□□□ -2.18
CHMP24386 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
CHMP24386 POLR3GP1-201ENST00000594073 261 ntBASIC1.43□□□□□ -2.18
CHMP24386 AC104695.3-201ENST00000604052 296 ntBASIC1.43□□□□□ -2.18
CHMP24386 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CHMP24386 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
CHMP24386 RNU6-833P-201ENST00000363486 107 ntBASIC1.42□□□□□ -2.18
CHMP24386 SNORD113-8-201ENST00000363497 74 ntBASIC1.42□□□□□ -2.18
CHMP24386 SNORA22B-201ENST00000383876 138 ntBASIC1.42□□□□□ -2.18
CHMP24386 SNORD41-201ENST00000386967 70 ntBASIC1.42□□□□□ -2.18
CHMP24386 Y_RNA.602-201ENST00000410535 92 ntBASIC1.42□□□□□ -2.18
CHMP24386 RNU6-947P-201ENST00000516264 106 ntBASIC1.42□□□□□ -2.18
CHMP24386 RNU7-116P-201ENST00000516940 62 ntBASIC1.42□□□□□ -2.18
CHMP24386 MIR4300-201ENST00000581016 96 ntBASIC1.42□□□□□ -2.18
CHMP24386 RAC1P9-201ENST00000604990 392 ntBASIC1.42□□□□□ -2.18
CHMP24386 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
CHMP24386 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
CHMP24386 AC027279.3-201ENST00000625055 122 ntBASIC1.42□□□□□ -2.18
CHMP24386 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CHMP24386 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
CHMP24386 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHMP24386 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
CHMP24386 RNU6-1084P-201ENST00000362498 107 ntBASIC1.41□□□□□ -2.18
CHMP24386 RNU4-80P-201ENST00000363200 141 ntBASIC1.41□□□□□ -2.18
CHMP24386 U8.5-201ENST00000364528 136 ntBASIC1.41□□□□□ -2.18
CHMP24386 RNU6-1323P-201ENST00000384025 107 ntBASIC1.41□□□□□ -2.18
CHMP24386 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
CHMP24386 U8.19-201ENST00000459095 133 ntBASIC1.41□□□□□ -2.18
CHMP24386 HMGN1P10-201ENST00000474557 553 ntBASIC1.41□□□□□ -2.18
CHMP24386 AC117454.1-201ENST00000491120 168 ntBASIC1.41□□□□□ -2.18
CHMP24386 HMGN1P7-201ENST00000491722 313 ntBASIC1.41□□□□□ -2.18
CHMP24386 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
CHMP24386 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP24386 Y_RNA.183-201ENST00000363882 113 ntBASIC1.4□□□□□ -2.19
CHMP24386 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
CHMP24386 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.4□□□□□ -2.19
CHMP24386 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.4□□□□□ -2.19
CHMP24386 MIR1252-201ENST00000408861 65 ntBASIC1.4□□□□□ -2.19
CHMP24386 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.4□□□□□ -2.19
CHMP24386 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
CHMP24386 RPL23AP54-201ENST00000495129 419 ntBASIC1.4□□□□□ -2.19
CHMP24386 RNU6-897P-201ENST00000517135 105 ntBASIC1.4□□□□□ -2.19
CHMP24386 AC024405.2-202ENST00000532731 184 ntBASIC1.4□□□□□ -2.19
CHMP24386 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
CHMP24386 MIR4762-201ENST00000585261 75 ntBASIC1.4□□□□□ -2.19
CHMP24386 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
CHMP24386 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP24386 MIR526A1-201ENST00000384897 85 ntBASIC1.39□□□□□ -2.19
CHMP24386 MIR522-201ENST00000385071 87 ntBASIC1.39□□□□□ -2.19
CHMP24386 RNU6-131P-201ENST00000391144 107 ntBASIC1.39□□□□□ -2.19
CHMP24386 SNORA17.3-201ENST00000391159 129 ntBASIC1.39□□□□□ -2.19
CHMP24386 SNRPGP10-201ENST00000432323 225 ntBASIC1.39□□□□□ -2.19
CHMP24386 Y_RNA.711-201ENST00000516993 102 ntBASIC1.39□□□□□ -2.19
CHMP24386 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
CHMP24386 AL357312.1-201ENST00000603879 298 ntBASIC1.39□□□□□ -2.19
CHMP24386 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
CHMP24386 Y_RNA.216-201ENST00000364205 93 ntBASIC1.38□□□□□ -2.19
CHMP24386 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
CHMP24386 RNU6-102P-201ENST00000384485 104 ntBASIC1.38□□□□□ -2.19
CHMP24386 MIR452-201ENST00000385020 85 ntBASIC1.38□□□□□ -2.19
CHMP24386 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CHMP24386 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
CHMP24386 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP24386 SNORA40.15-201ENST00000516884 107 ntBASIC1.38□□□□□ -2.19
CHMP24386 Y_RNA.714-201ENST00000517065 90 ntBASIC1.38□□□□□ -2.19
CHMP24386 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
CHMP24386 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.38□□□□□ -2.19
CHMP24386 AP003357.1-201ENST00000604497 148 ntBASIC1.38□□□□□ -2.19
CHMP24386 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
CHMP24386 MIR548AY-201ENST00000617669 107 ntBASIC1.38□□□□□ -2.19
CHMP24386 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHMP24386 U8.7-201ENST00000364940 136 ntBASIC1.37□□□□□ -2.19
CHMP24386 RNU6-1248P-201ENST00000391096 64 ntBASIC1.37□□□□□ -2.19
CHMP24386 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
CHMP24386 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
CHMP24386 AC108729.3-201ENST00000513484 108 ntBASIC1.37□□□□□ -2.19
CHMP24386 RNU7-115P-201ENST00000516433 55 ntBASIC1.37□□□□□ -2.19
CHMP24386 SNORD45.4-201ENST00000516629 73 ntBASIC1.37□□□□□ -2.19
CHMP24386 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CHMP24386 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
CHMP24386 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
CHMP24386 MIR4498-201ENST00000577599 66 ntBASIC1.37□□□□□ -2.19
CHMP24386 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
CHMP24386 MIR3171-201ENST00000584270 74 ntBASIC1.37□□□□□ -2.19
CHMP24386 JPX_2.1-201ENST00000614161 69 ntBASIC1.37□□□□□ -2.19
CHMP24386 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CHMP24386 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CHMP24386 RNU6-1048P-201ENST00000364054 107 ntBASIC1.36□□□□□ -2.19
CHMP24386 Y_RNA.203-201ENST00000364106 102 ntBASIC1.36□□□□□ -2.19
CHMP24386 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
CHMP24386 Y_RNA.338-201ENST00000365320 114 ntBASIC1.36□□□□□ -2.19
CHMP24386 Y_RNA.527-201ENST00000384573 102 ntBASIC1.36□□□□□ -2.19
CHMP24386 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms