Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.124-201ENST00000363339 93 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 RNU6-674P-201ENST00000363831 107 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 RNU6-820P-201ENST00000384273 107 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 MIR450A2-201ENST00000385022 100 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP201-201ENST00000410316 124 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 AC021739.1-201ENST00000559631 174 ntBASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
NOTCH3Q9UM47 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP125-201ENST00000364843 120 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.328-201ENST00000365208 113 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.622-201ENST00000411091 108 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AC244505.4-201ENST00000434905 287 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 SSXP5-201ENST00000443473 287 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 RPS26P45-201ENST00000471748 340 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 HMGB1P22-201ENST00000505315 124 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 RNU6-1337P-201ENST00000516525 95 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 ACA59.2-201ENST00000517061 156 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AC018630.3-201ENST00000542637 96 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 MIR548AY-201ENST00000617669 107 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 MIR367-201ENST00000362299 68 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.521-201ENST00000384560 114 ntBASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
NOTCH3Q9UM47 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 RNU1-17P-201ENST00000363022 152 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.120-201ENST00000363304 110 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 RNU6-335P-201ENST00000364563 113 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 RNY1P7-201ENST00000384743 110 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 SNORD108-201ENST00000459332 71 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 AC007012.1-201ENST00000567192 175 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 AL021707.8-201ENST00000609428 183 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 AL442128.1-201ENST00000615151 90 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 uc_338.4-201ENST00000616635 176 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 AC007256.1-201ENST00000392253 2765 ntBASIC1.76□□□□□ -2.13
NOTCH3Q9UM47 SNORA27.1-201ENST00000362604 124 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.52-201ENST00000362760 96 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.220-201ENST00000364244 109 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 RNU1-91P-201ENST00000364746 163 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.587-201ENST00000391210 103 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 CYCSP48-201ENST00000417124 323 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AC027124.2-201ENST00000428249 105 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AC108667.1-201ENST00000428618 249 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 HMGN1P33-201ENST00000432945 451 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP236-201ENST00000516169 116 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AL021368.2-201ENST00000606125 5352 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 FAM35BP-202ENST00000497389 3337 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 DEFA7P-201ENST00000382676 285 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 SNORA18.2-201ENST00000383865 132 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 SNORD78.1-201ENST00000390866 65 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 MLLT10P1-201ENST00000418346 262 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 RPL23AP62-201ENST00000463396 453 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 ATP5EP1-201ENST00000510257 156 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AC091178.2-201ENST00000584401 117 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AL049861.1-201ENST00000603130 150 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
NOTCH3Q9UM47 AP006437.1-201ENST00000641440 3685 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 snoU2_19.1-201ENST00000362361 80 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 RNU6-228P-201ENST00000362700 106 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 MIR624-201ENST00000385217 97 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 RNU6-321P-201ENST00000410912 106 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP127-201ENST00000411051 133 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 SCARNA17.1-201ENST00000516211 143 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 SCARNA17.2-201ENST00000516334 143 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP153-201ENST00000516498 76 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.690-201ENST00000516603 95 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 RNA5SP468-201ENST00000516782 93 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 EIF4A1P12-201ENST00000551910 141 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 AC025281.1-201ENST00000567026 265 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 SCARNA17.4-201ENST00000614296 143 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 Y_RNA.818-201ENST00000618813 71 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 AC015726.2-201ENST00000620112 122 ntBASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.74□□□□□ -2.13
NOTCH3Q9UM47 AL136964.1-201ENST00000622038 2990 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms