Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 snoU13.9-201ENST00000458927 103 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 AC008737.2-201ENST00000599446 118 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USP44Q9H0E7 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 Y_RNA.64-201ENST00000362845 102 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 RNU6-505P-201ENST00000384427 107 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 RNU6-21P-201ENST00000384710 107 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 Y_RNA.602-201ENST00000410535 92 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 AC024067.1-201ENST00000426199 223 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 RPS27P1-201ENST00000450552 247 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.78□□□□□ -2.12
USP44Q9H0E7 SEPT14P8-201ENST00000508026 178 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 RNU6-496P-201ENST00000516145 99 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 RNU6-341P-201ENST00000516973 96 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 SNORD113-5-201ENST00000607261 78 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 MIR6079-201ENST00000635807 62 ntBASIC1.78□□□□□ -2.12
USP44Q9H0E7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.77□□□□□ -2.13
USP44Q9H0E7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
USP44Q9H0E7 snoU2_19.2-201ENST00000363024 80 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 RNU6-117P-201ENST00000365415 107 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 MIR215-201ENST00000384858 110 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AL034345.1-201ENST00000407768 123 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 MIR548F4-201ENST00000408515 105 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 RPL21P38-201ENST00000418090 167 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 HSPE1P25-201ENST00000455484 251 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 U8.19-201ENST00000459095 133 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.77□□□□□ -2.13
USP44Q9H0E7 DEFB117-201ENST00000602356 141 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 AC073413.2-201ENST00000604332 360 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.77□□□□□ -2.13
USP44Q9H0E7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USP44Q9H0E7 ZNF209P-201ENST00000593450 2304 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 Y_RNA.162-201ENST00000363683 102 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 Y_RNA.222-201ENST00000364264 102 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNU6-376P-201ENST00000384731 106 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNU6-1109P-201ENST00000391187 107 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MTND2P23-201ENST00000422990 651 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 AL731563.1-201ENST00000442202 214 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MTND5P22-201ENST00000458380 195 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNU6-327P-201ENST00000516270 127 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 AL161670.1-201ENST00000554348 137 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 SNORA77B-201ENST00000578179 125 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MIR3145-201ENST00000580727 82 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
USP44Q9H0E7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
USP44Q9H0E7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.75□□□□□ -2.13
USP44Q9H0E7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.75□□□□□ -2.13
USP44Q9H0E7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 Y_RNA.512-201ENST00000384518 102 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.75□□□□□ -2.13
USP44Q9H0E7 PGBD4P5-201ENST00000445958 426 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 RNU6-1143P-201ENST00000516125 104 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 AP003733.2-201ENST00000529409 171 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 AC136443.5-201ENST00000603741 370 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 snoU13.31-201ENST00000607291 104 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.75□□□□□ -2.13
USP44Q9H0E7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
USP44Q9H0E7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
USP44Q9H0E7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
USP44Q9H0E7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USP44Q9H0E7 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 Y_RNA.459-201ENST00000384251 102 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 AL161935.2-201ENST00000414627 60 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 RPL30P13-201ENST00000418873 348 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 SNRPGP13-201ENST00000442212 177 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 RNU6-635P-201ENST00000516651 102 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.74□□□□□ -2.13
USP44Q9H0E7 AP002004.2-201ENST00000531656 154 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
USP44Q9H0E7 RNU4-90P-201ENST00000362773 141 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 SNORD116-13-201ENST00000384408 92 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 Y_RNA.541-201ENST00000384640 113 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 MIR194-1-201ENST00000384892 85 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
USP44Q9H0E7 POLR2KP2-201ENST00000438155 177 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 HSPE1P21-201ENST00000438283 308 ntBASIC1.73□□□□□ -2.13
USP44Q9H0E7 AL118496.2-201ENST00000448300 230 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms