Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AC062016.1-201ENST00000355719 319 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RNU6-220P-201ENST00000390919 107 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 SNORA19.1-201ENST00000410656 129 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RPS3AP1-201ENST00000413190 320 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AF228730.3-201ENST00000436691 102 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AC006539.3-201ENST00000454258 129 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 SNORD77.4-201ENST00000516158 81 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RNU6-991P-201ENST00000516168 107 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 RPL23AP91-201ENST00000569211 455 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AC097639.2-201ENST00000603159 172 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM40Q8WWA1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM40Q8WWA1 RNU6-461P-201ENST00000364195 107 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.220-201ENST00000364244 109 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.544-201ENST00000384650 113 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 MIR450A2-201ENST00000385022 100 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 MIR624-201ENST00000385217 97 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP127-201ENST00000411051 133 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 AC016909.1-201ENST00000415916 166 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 RPS27P22-201ENST00000478056 241 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 RPL36AP21-201ENST00000490372 323 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 MIR3616-201ENST00000584070 92 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 RNU6-94P-201ENST00000607728 107 ntBASIC3.15□□□□□ -1.91
TMEM40Q8WWA1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 MIR449A-201ENST00000362113 91 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNY1P10-201ENST00000363268 113 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNU6-820P-201ENST00000384273 107 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNU6-1113P-201ENST00000384348 107 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNU6-1152P-201ENST00000384576 107 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 MIR561-201ENST00000385216 97 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP225-201ENST00000410874 135 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 AC123900.1-201ENST00000420390 96 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 MTATP6P21-201ENST00000440681 189 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 AL109933.2-201ENST00000452651 260 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 AC093259.1-201ENST00000509755 300 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP236-201ENST00000516169 116 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 AC007751.1-201ENST00000529260 376 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.14□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.323-201ENST00000365157 109 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 SNORA1-201ENST00000384107 130 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.486-201ENST00000384398 107 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 RNU6-1146P-201ENST00000516282 102 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 AC107016.2-201ENST00000547968 190 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 MIR3129-201ENST00000581095 76 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 Pinc.1-201ENST00000616452 154 ntBASIC3.13□□□□□ -1.91
TMEM40Q8WWA1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 RNU4-13P-201ENST00000364019 141 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.332-201ENST00000365271 113 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.366-201ENST00000365540 102 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP136-201ENST00000410906 107 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP184-201ENST00000411071 108 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 AC015720.1-201ENST00000565251 277 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 MIR3117-201ENST00000584034 78 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 AC134878.1-201ENST00000619901 243 ntBASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM40Q8WWA1 AL589743.1-201ENST00000551932 2712 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.49-201ENST00000362714 112 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.203-201ENST00000364106 102 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 Y_RNA.219-201ENST00000364232 113 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RNU1-112P-201ENST00000364401 164 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RNU6-972P-201ENST00000391208 107 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 MIR1253-201ENST00000408273 105 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 AC003685.2-201ENST00000422795 395 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 MTATP8P2-201ENST00000435212 202 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 SNORD11-201ENST00000459124 84 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RNU7-149P-201ENST00000516739 59 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 RNU6-667P-201ENST00000517186 102 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 SNORD115-40-201ENST00000606510 82 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 AL137067.1-201ENST00000615933 120 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 MALAT1.1-201ENST00000618249 95 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 AC025521.1-201ENST00000621624 286 ntBASIC3.11□□□□□ -1.91
TMEM40Q8WWA1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms