Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SNRPGP10-201ENST00000432323 225 ntBASIC-1.77□□□□□ -2.69
CFAP43Q8NDM7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.77□□□□□ -2.69
CFAP43Q8NDM7 HSPE1P23-201ENST00000509838 286 ntBASIC-1.77□□□□□ -2.69
CFAP43Q8NDM7 uc_338.10-201ENST00000621872 182 ntBASIC-1.77□□□□□ -2.69
CFAP43Q8NDM7 RNU6-481P-201ENST00000384194 107 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 MIR518B-201ENST00000385127 83 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 SNORD64-201ENST00000386683 67 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 SNORD110-201ENST00000408189 75 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 AC114878.1-201ENST00000441166 358 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.78□□□□□ -2.69
CFAP43Q8NDM7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 MIR3912-201ENST00000577566 105 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 MIR6740-201ENST00000618268 113 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 AC010332.2-201ENST00000613083 1904 ntBASIC-1.79□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 SNORA1-201ENST00000384107 130 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 RNU6-535P-201ENST00000384722 107 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 SNORD93-201ENST00000408813 74 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 SSR1P2-201ENST00000415208 787 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 MTCO3P38-201ENST00000468910 766 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 AC011352.1-201ENST00000512300 793 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 POLR3GP1-201ENST00000594073 261 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 AC004223.4-201ENST00000612426 332 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 RNU6-901P-201ENST00000384593 106 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 RNU6-376P-201ENST00000384731 106 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 AP002782.1-201ENST00000623107 614 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 SNORA43.4-201ENST00000629559 138 ntBASIC-1.8□□□□□ -2.7
CFAP43Q8NDM7 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 snoU13.2-201ENST00000459201 104 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 MTND4P33-201ENST00000556706 766 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 Z94722.1-201ENST00000604328 474 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.81□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 RNU6-511P-201ENST00000363496 107 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AL031274.1-201ENST00000450334 232 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AC117522.1-201ENST00000509821 380 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AC026421.1-201ENST00000519101 163 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AP001836.1-201ENST00000604675 523 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 MIR4791-201ENST00000607666 84 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 AL445523.1-201ENST00000451184 1362 ntBASIC-1.82□□□□□ -2.7
CFAP43Q8NDM7 RNU6-777P-201ENST00000364265 104 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC090844.1-201ENST00000422019 156 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 MRPS10P1-201ENST00000448483 130 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC091959.1-201ENST00000495857 238 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC010587.1-201ENST00000505809 469 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC010598.1-201ENST00000510378 103 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 U8.17-201ENST00000391292 132 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC105417.1-201ENST00000514691 285 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 RNA5SP20-201ENST00000515976 84 ntBASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.83□□□□□ -2.7
CFAP43Q8NDM7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 AP000542.1-201ENST00000448473 371 ntBASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 SNORD45.4-201ENST00000516629 73 ntBASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 MIR382-201ENST00000637119 76 ntBASIC-1.84□□□□□ -2.7
CFAP43Q8NDM7 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 AL590623.1-201ENST00000427864 105 ntBASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.85□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 RNU6-509P-201ENST00000363519 107 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 RNU2-11P-201ENST00000459191 187 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 AC012414.2-201ENST00000559474 187 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 RNU6-190P-201ENST00000384154 102 ntBASIC-1.86□□□□□ -2.71
CFAP43Q8NDM7 SNORD38C-201ENST00000384381 69 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms