Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MTCO1P20-201ENST00000425366 358 ntBASIC-0.56□□□□□ -2.5
CXCL1P09341 AL512326.2-201ENST00000426359 151 ntBASIC-0.56□□□□□ -2.5
CXCL1P09341 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.56□□□□□ -2.5
CXCL1P09341 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.56□□□□□ -2.5
CXCL1P09341 RNU7-62P-201ENST00000458856 62 ntBASIC-0.56□□□□□ -2.5
CXCL1P09341 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.56□□□□□ -2.5
CXCL1P09341 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.56□□□□□ -2.5
CXCL1P09341 AL158211.1-201ENST00000566763 763 ntBASIC-0.56□□□□□ -2.5
CXCL1P09341 AL109933.3-201ENST00000619095 188 ntBASIC-0.56□□□□□ -2.5
CXCL1P09341 SNORA1.1-201ENST00000364671 133 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 RNU6-46P-201ENST00000383860 107 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 RNU6-281P-201ENST00000384212 103 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 SNORD38C-201ENST00000384381 69 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 MIR570-201ENST00000384917 97 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 ELOCP21-201ENST00000412558 336 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 MTATP6P18-201ENST00000417994 673 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 AL009048.1-201ENST00000450437 298 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.57□□□□□ -2.5
CXCL1P09341 SNORD42A-201ENST00000459584 64 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 MTND2P14-201ENST00000482139 351 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 MTCO2P30-201ENST00000503662 364 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.57□□□□□ -2.5
CXCL1P09341 RNU6-469P-201ENST00000516253 101 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 RNU7-156P-201ENST00000517214 74 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.57□□□□□ -2.5
CXCL1P09341 AC092747.3-201ENST00000603769 301 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 AC008536.2-201ENST00000607284 349 ntBASIC-0.57□□□□□ -2.5
CXCL1P09341 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 RNU6-187P-201ENST00000384139 106 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 RNU6-131P-201ENST00000391144 107 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 AL358934.1-201ENST00000432346 324 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 RNU7-63P-201ENST00000459054 62 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.58□□□□□ -2.5
CXCL1P09341 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 SNORA18.6-201ENST00000516792 115 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 MIR4645-201ENST00000583158 77 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 MIR4791-201ENST00000607666 84 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 uc_338.6-201ENST00000613544 171 ntBASIC-0.58□□□□□ -2.5
CXCL1P09341 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORD114-28-201ENST00000363610 72 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORD113-7-201ENST00000363762 77 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORD114-12-201ENST00000365400 75 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 MIR329-2-201ENST00000385029 84 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 BX295541.1-201ENST00000417774 250 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 RNU7-185P-201ENST00000459215 60 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.59□□□□□ -2.5
CXCL1P09341 RNU2-13P-201ENST00000515909 113 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORA25.10-201ENST00000515926 124 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORA19.2-201ENST00000516013 114 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 IGLVI-20-201ENST00000519296 130 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 AL121757.2-201ENST00000611223 313 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 Pinc.1-201ENST00000616452 154 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 AC072046.2-201ENST00000618366 268 ntBASIC-0.59□□□□□ -2.5
CXCL1P09341 SNORD114-31-201ENST00000363219 75 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 SNORD14C-201ENST00000365382 88 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 RNU6-652P-201ENST00000365488 107 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 RNU6-297P-201ENST00000384636 107 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 MIR489-201ENST00000384923 84 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 U8.17-201ENST00000391292 132 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
CXCL1P09341 MIR1257-201ENST00000408490 117 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.6□□□□□ -2.51
CXCL1P09341 TRBVB-201ENST00000477100 408 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 AC091959.1-201ENST00000495857 238 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.6□□□□□ -2.51
CXCL1P09341 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.6□□□□□ -2.51
CXCL1P09341 RNU6-248P-201ENST00000410720 107 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 POLR2KP2-201ENST00000438155 177 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 RPL39P34-201ENST00000477141 156 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 MIR3666-201ENST00000607845 111 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 AC073534.2-201ENST00000620377 381 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 MIR499B-201ENST00000636498 73 ntBASIC-0.61□□□□□ -2.51
CXCL1P09341 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 SNORD14E-201ENST00000364009 85 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 SNORA1.2-201ENST00000365189 134 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 SNORA26-201ENST00000391286 122 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 RNU6-847P-201ENST00000411115 108 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 SNRPGP10-201ENST00000432323 225 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.62□□□□□ -2.51
CXCL1P09341 UQCRBP2-201ENST00000447827 297 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 RNU6-135P-201ENST00000516769 101 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.62□□□□□ -2.51
CXCL1P09341 MIR3152-201ENST00000579801 74 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 AC092447.9-201ENST00000603395 144 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.62□□□□□ -2.51
CXCL1P09341 AC091304.10-201ENST00000641554 121 ntBASIC-0.62□□□□□ -2.51
CXCL1P09341 AC010332.2-201ENST00000613083 1904 ntBASIC-0.63□□□□□ -2.51
CXCL1P09341 RNU6-454P-201ENST00000364292 107 ntBASIC-0.63□□□□□ -2.51
CXCL1P09341 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.63□□□□□ -2.51
CXCL1P09341 MTCO2P27-201ENST00000420740 428 ntBASIC-0.63□□□□□ -2.51
CXCL1P09341 RNU7-175P-201ENST00000515915 61 ntBASIC-0.63□□□□□ -2.51
CXCL1P09341 RNU6-311P-201ENST00000516224 102 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms