Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC004866.1-201ENST00000411748 78 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 MTND4P33-201ENST00000556706 766 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 DEFB131E-202ENST00000602581 683 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AC073648.5-201ENST00000603502 305 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AC069431.2-201ENST00000604149 1099 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AC078880.5-201ENST00000617845 421 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 SNORD68-201ENST00000363214 84 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNU6-289P-201ENST00000364093 107 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 SNORD115-48-201ENST00000364764 76 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNU6-721P-201ENST00000410155 105 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNU6-855P-201ENST00000410395 104 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 AC114491.1-201ENST00000416095 246 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNU2-11P-201ENST00000459191 187 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 snoU13.2-201ENST00000459201 104 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 uc_338.19-201ENST00000616808 99 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 MIR6851-201ENST00000617060 67 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.37□□□□□ -2.63
SCN11AQ9UI33 RNY4P27-201ENST00000363341 96 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 RNA5SP261-201ENST00000410536 106 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 RNU2-39P-201ENST00000410604 198 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 USP9YP16-201ENST00000430287 407 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 EPS15P1-201ENST00000448836 336 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 AC117522.1-201ENST00000509821 380 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 RNU7-172P-201ENST00000517125 64 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 AC100814.1-201ENST00000606963 623 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 MTND1P7-201ENST00000632801 297 ntBASIC-1.38□□□□□ -2.63
SCN11AQ9UI33 SNORD74.6-201ENST00000364796 70 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR518F-201ENST00000384973 87 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MT-TF-201ENST00000387314 71 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 SNORD110-201ENST00000408189 75 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR320B2-201ENST00000408479 138 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MTND2P6-201ENST00000455337 1030 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 RNA5SP470-201ENST00000516463 106 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 AC023158.2-201ENST00000614876 543 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MTND5P18-201ENST00000445624 1801 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 BX276092.1-201ENST00000427368 251 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MTCO3P38-201ENST00000468910 766 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR3179-1-201ENST00000578940 84 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR3179-2-201ENST00000579107 84 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR3179-3-201ENST00000579566 84 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 MIR3179-4-201ENST00000617599 84 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 AC068137.4-201ENST00000638485 296 ntBASIC-1.39□□□□□ -2.63
SCN11AQ9UI33 AL445523.1-201ENST00000451184 1362 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 RNU6-455P-201ENST00000384681 107 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 AC114878.1-201ENST00000441166 358 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 AC026414.1-201ENST00000504046 698 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 MTND3P25-201ENST00000509243 135 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 AL121757.2-201ENST00000611223 313 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 MIR6740-201ENST00000618268 113 ntBASIC-1.4□□□□□ -2.63
SCN11AQ9UI33 AC073343.1-201ENST00000328239 651 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 SNORD115-2-201ENST00000362842 82 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 RNU6-535P-201ENST00000384722 107 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 SNORD28B-201ENST00000390993 75 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 MTATP6P26-201ENST00000445926 662 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 USP9YP12-201ENST00000450481 570 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 AC010587.1-201ENST00000505809 469 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 RNU6-158P-201ENST00000517104 100 ntBASIC-1.41□□□□□ -2.63
SCN11AQ9UI33 RNU5B-1-201ENST00000363286 116 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 ELOCP17-201ENST00000414751 326 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 SSR1P2-201ENST00000415208 787 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AL031779.1-201ENST00000415663 330 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 TIMM9P2-201ENST00000419324 266 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 UQCRBP2-201ENST00000447827 297 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AL500527.2-201ENST00000454105 95 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 MIR4770-201ENST00000579149 58 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 SNORD115-42-201ENST00000364273 82 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNU6-853P-201ENST00000364306 107 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNY3P13-201ENST00000365542 102 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNU6-926P-201ENST00000384075 107 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNU6-900P-201ENST00000384498 102 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNU6-901P-201ENST00000384593 106 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AC074085.1-201ENST00000413598 418 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 RNA5SP454-201ENST00000517231 127 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms