Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC013412.1-201ENST00000610687 192 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AL356292.1-201ENST00000283110 373 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 RNU6-743P-201ENST00000364151 106 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.634-201ENST00000364811 113 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 RNU6-418P-201ENST00000384035 107 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AC008134.1-201ENST00000420943 193 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 CALM2P4-201ENST00000430810 426 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AC108938.1-201ENST00000451204 136 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 SNORD65B-201ENST00000459126 73 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 RN7SKP12-201ENST00000516275 143 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AC027419.1-201ENST00000522976 328 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AC079600.2-201ENST00000550076 130 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AL160236.1-201ENST00000556317 195 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 MIR4298-201ENST00000584380 73 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 AL442128.1-201ENST00000615151 90 ntBASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM40Q8WWA1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
TMEM40Q8WWA1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 RNU6-674P-201ENST00000363831 107 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 RNU6-1014P-201ENST00000383940 103 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 MIR95-201ENST00000385072 81 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 AC010531.2-201ENST00000465012 153 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 RPS26P55-201ENST00000471178 356 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 RNU6-970P-201ENST00000516312 107 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 SNORA18.4-201ENST00000516440 124 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 RNU2-34P-201ENST00000516534 121 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 SNORA48.11-201ENST00000517015 89 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 AC005972.2-201ENST00000604690 348 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
TMEM40Q8WWA1 AL355596.1-201ENST00000565399 3996 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 MIR891A-201ENST00000401237 79 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 RPL39P34-201ENST00000477141 156 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 Y_RNA.685-201ENST00000516532 108 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 AL035470.1-201ENST00000622571 220 ntBASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TMEM40Q8WWA1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 SNORA63.5-201ENST00000363548 123 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 RNA5SP153-201ENST00000516498 76 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 RNA5SP281-201ENST00000516504 135 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 RNU7-116P-201ENST00000516940 62 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 MIR4319-201ENST00000577285 85 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 AL355297.2-201ENST00000604792 129 ntBASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM40Q8WWA1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 MIR590-201ENST00000385008 97 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 AC109327.2-201ENST00000448339 378 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 RNA5SP20-201ENST00000515976 84 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 RNU6-365P-201ENST00000517113 106 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 RNU1-104P-201ENST00000517280 175 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 AL929325.1-201ENST00000603096 117 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 AC006435.5-201ENST00000624486 112 ntBASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TMEM40Q8WWA1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 MIR494-201ENST00000349529 81 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 RNU6-1240P-201ENST00000365155 104 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 SNORA9.2-201ENST00000365361 133 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 MIR570-201ENST00000384917 97 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 SNORD78.1-201ENST00000390866 65 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 RNA5SP511-201ENST00000410487 115 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 uc_338.4-201ENST00000616635 176 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM40Q8WWA1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM40Q8WWA1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms