Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR8063-201ENST00000621930 81 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
ABCD3P28288 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 RNA5SP482-201ENST00000391269 118 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 AL591806.2-201ENST00000433122 173 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 RNU6-63P-201ENST00000516690 95 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 AC015720.1-201ENST00000565251 277 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCD3P28288 AL356055.1-201ENST00000602528 446 ntBASIC1.69□□□□□ -2.14
ABCD3P28288 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCD3P28288 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ABCD3P28288 SNORA1B-201ENST00000362535 133 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 RNU6-1227P-201ENST00000383981 107 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 MIR513A1-201ENST00000385138 129 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCD3P28288 RPL30P13-201ENST00000418873 348 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 AC005534.2-201ENST00000431047 433 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 MTCYBP6-201ENST00000441810 138 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCD3P28288 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 RNU6-1291P-201ENST00000516591 104 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 MIR6845-201ENST00000613182 61 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.68□□□□□ -2.14
ABCD3P28288 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCD3P28288 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ABCD3P28288 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ABCD3P28288 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
ABCD3P28288 RNU6-450P-201ENST00000364654 107 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 SNORD1A-201ENST00000364968 72 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 Y_RNA.455-201ENST00000384230 98 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 AC233266.1-201ENST00000454518 96 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 U8.19-201ENST00000459095 133 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 Y_RNA.638-201ENST00000459374 113 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 AL355297.3-201ENST00000604082 446 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 AC242852.1-201ENST00000612151 96 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 MIR376A1-201ENST00000616574 68 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 AC244015.1-201ENST00000622301 99 ntBASIC1.67□□□□□ -2.14
ABCD3P28288 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ABCD3P28288 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 Y_RNA.152-201ENST00000363578 100 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 Y_RNA.456-201ENST00000384232 111 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 SNORD116-13-201ENST00000384408 92 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU6-136P-201ENST00000384663 107 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU6-1248P-201ENST00000391096 64 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU4-30P-201ENST00000410245 143 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU6-855P-201ENST00000410395 104 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCD3P28288 RPS4XP11-201ENST00000446897 772 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 AL049830.1-201ENST00000468034 425 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RNU6-897P-201ENST00000517135 105 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 AC136932.1-201ENST00000574771 208 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 MIR4300-201ENST00000581016 96 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCD3P28288 AC005972.2-201ENST00000604690 348 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 RAC1P9-201ENST00000604990 392 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 PRR13P7-201ENST00000605538 430 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 AC004832.4-201ENST00000608952 331 ntBASIC1.66□□□□□ -2.14
ABCD3P28288 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.65□□□□□ -2.15
ABCD3P28288 SNORD81.1-201ENST00000363064 77 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 Y_RNA.276-201ENST00000364732 109 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 RNU6-1065P-201ENST00000384513 106 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 MIR660-201ENST00000385235 97 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 SNORA12.1-201ENST00000390873 148 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCD3P28288 POLR2KP2-201ENST00000438155 177 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 AC027119.1-201ENST00000440877 241 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 RPS20P10-201ENST00000451209 253 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 RNU6-397P-201ENST00000516226 104 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 SNORA40.15-201ENST00000516884 107 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
ABCD3P28288 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCD3P28288 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCD3P28288 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
ABCD3P28288 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
ABCD3P28288 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCD3P28288 Y_RNA.216-201ENST00000364205 93 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 RNA5SP259-201ENST00000365541 109 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 Y_RNA.368-201ENST00000365547 113 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 OR9P1P-201ENST00000496431 281 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 RNU6-1046P-201ENST00000516538 107 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 MIR4680-201ENST00000580906 66 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 DEFB117-201ENST00000602356 141 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 SNORD3E-202ENST00000627253 216 ntBASIC1.64□□□□□ -2.15
ABCD3P28288 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ABCD3P28288 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
ABCD3P28288 SNORD113-8-201ENST00000363497 74 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 Y_RNA.341-201ENST00000365341 102 ntBASIC1.63□□□□□ -2.15
ABCD3P28288 SNORA33.2-201ENST00000365413 134 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 302 ms