Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR340-201ENST00000362125 95 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 RNU6-702P-201ENST00000364982 107 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 Y_RNA.446-201ENST00000384178 104 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 SNORD63-201ENST00000384262 68 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 MIR586-201ENST00000385035 97 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXC4P09017 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXC4P09017 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXC4P09017 MIR1283-1-201ENST00000408494 87 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXC4P09017 TRBVB-201ENST00000477100 408 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 RNU7-110P-201ENST00000516891 62 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 DEFB108E-201ENST00000524692 240 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXC4P09017 MIR3674-201ENST00000636576 68 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
HOXC4P09017 AC010615.1-201ENST00000594254 1764 ntBASIC1.36□□□□□ -2.19
HOXC4P09017 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNU5F-3P-201ENST00000363767 117 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNA5SP493-201ENST00000364115 91 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 Y_RNA.237-201ENST00000364439 102 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 SNORD31B-201ENST00000364977 69 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 Y_RNA.307-201ENST00000365022 117 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 Y_RNA.462-201ENST00000384268 102 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 Y_RNA.581-201ENST00000391017 97 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 MIR1302-3-201ENST00000408128 138 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 MIR1302-6-201ENST00000408466 90 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 MRPS10P1-201ENST00000448483 130 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AC016925.1-201ENST00000458303 298 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 SNORD127-201ENST00000458892 86 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 TRMT112P2-201ENST00000512910 132 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNU6-1143P-201ENST00000516125 104 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 RNU6-1338P-201ENST00000516328 91 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 CYCSP23-201ENST00000519781 313 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC4P09017 MIR3145-201ENST00000580727 82 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AC022441.3-201ENST00000605737 136 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 AC011373.1-201ENST00000607270 237 ntBASIC1.35□□□□□ -2.19
HOXC4P09017 MIR410-201ENST00000362222 80 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 U3.8-201ENST00000363675 217 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 Y_RNA.230-201ENST00000364348 109 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 SNORD114-6-201ENST00000364393 72 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 Y_RNA.331-201ENST00000365267 102 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU6-1264P-201ENST00000383891 107 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU6-975P-201ENST00000384296 105 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 Y_RNA.477-201ENST00000384352 108 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU6-1026P-201ENST00000384465 108 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 MIR1185-2-201ENST00000408687 86 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU5A-5P-201ENST00000411054 116 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.34□□□□□ -2.19
HOXC4P09017 RNU6-1132P-201ENST00000459214 107 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC005840.1-201ENST00000498412 377 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.34□□□□□ -2.19
HOXC4P09017 SCARNA24.2-201ENST00000516968 130 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC004817.2-201ENST00000561794 651 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 MIR3169-201ENST00000578032 83 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC005786.1-201ENST00000588553 154 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC012433.1-201ENST00000588916 398 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 RPL17P51-201ENST00000605218 238 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AC062037.2-201ENST00000610137 73 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
HOXC4P09017 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
HOXC4P09017 Y_RNA.14-201ENST00000362415 103 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 SNORA72.2-201ENST00000365028 127 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 Y_RNA.332-201ENST00000365271 113 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNU6-438P-201ENST00000365561 103 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 Y_RNA.418-201ENST00000384029 102 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNU6-21P-201ENST00000384710 107 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNU6-57P-201ENST00000411348 103 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AC016909.1-201ENST00000415916 166 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AC139712.2-201ENST00000424302 339 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 MTCO1P44-201ENST00000441935 243 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.33□□□□□ -2.2
HOXC4P09017 RNU1-131P-201ENST00000458943 161 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 SEPT14P8-201ENST00000508026 178 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 MIR3128-201ENST00000581957 66 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 MIR4753-201ENST00000585119 83 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AC006006.1-201ENST00000603082 144 ntBASIC1.33□□□□□ -2.2
HOXC4P09017 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.33□□□□□ -2.2
HOXC4P09017 SNORD113-5-201ENST00000607261 78 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms