Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 MTND3P21-201ENST00000433774 331 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 SNORA40.9-201ENST00000515895 93 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 SNORA74.3-201ENST00000517108 154 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR5701-3-201ENST00000578890 82 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR5701-1-201ENST00000585138 82 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 Z83818.1-201ENST00000603584 150 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR5701-2-201ENST00000615634 82 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 AL591926.4-201ENST00000616895 298 ntBASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.49□□□□□ -2.33
TRBV9A0A0B4J1U6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU6-454P-201ENST00000364292 107 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 U8.5-201ENST00000364528 136 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 Y_RNA.557-201ENST00000384680 107 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR499A-201ENST00000384903 122 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 MTND1P29-201ENST00000448112 647 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 AC098869.1-201ENST00000481627 292 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 MTND4LP26-201ENST00000518144 282 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 MTND2P38-201ENST00000522536 667 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 AC004812.1-201ENST00000540773 146 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR6788-201ENST00000618842 66 ntBASIC0.48□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU6-831P-201ENST00000384548 107 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 MIR1185-1-201ENST00000408598 86 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 RNA5SP511-201ENST00000410487 115 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 AC092423.1-201ENST00000430165 186 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU7-41P-201ENST00000515917 61 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 RNU6-94P-201ENST00000607728 107 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 AC005014.2-201ENST00000607795 599 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 AF250324.2-201ENST00000608299 610 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
TRBV9A0A0B4J1U6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.2-201ENST00000362330 96 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.9-201ENST00000362354 101 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 RNY1P16-201ENST00000363063 111 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.157-201ENST00000363638 102 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.243-201ENST00000364481 109 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 RNA5SP118-201ENST00000410385 109 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AC074085.1-201ENST00000413598 418 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AL353997.1-201ENST00000432936 108 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU7-43P-201ENST00000516554 64 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 SNORA18.7-201ENST00000516910 131 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AC105029.1-201ENST00000520250 669 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AP003716.2-201ENST00000528260 108 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AC093027.1-201ENST00000546698 429 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR4764-201ENST00000580680 88 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 AC018462.2-201ENST00000605375 395 ntBASIC0.46□□□□□ -2.34
TRBV9A0A0B4J1U6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-1084P-201ENST00000362498 107 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.358-201ENST00000365491 99 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR181A1-201ENST00000385026 110 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR548J-201ENST00000408833 112 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-1016P-201ENST00000516689 94 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR4762-201ENST00000585261 75 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 AC103591.3-201ENST00000608684 209 ntBASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.45□□□□□ -2.34
TRBV9A0A0B4J1U6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.517-201ENST00000384551 106 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.573-201ENST00000384763 105 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 SNORD111-201ENST00000408139 94 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 MLLT10P1-201ENST00000418346 262 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 U8.22-201ENST00000459141 133 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-1337P-201ENST00000516525 95 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 MIR151B-201ENST00000584249 96 ntBASIC0.44□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6-874P-201ENST00000362390 105 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC117470.1-201ENST00000381974 330 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.473-201ENST00000384333 102 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 SNORD12B-201ENST00000410433 91 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AL390729.2-201ENST00000416137 156 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 HMGN2P32-201ENST00000444648 269 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 RN7SKP164-201ENST00000516138 266 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 Y_RNA.682-201ENST00000516457 100 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC022616.4-201ENST00000522985 181 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC024909.2-201ENST00000553035 286 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AC006380.1-201ENST00000603598 186 ntBASIC0.43□□□□□ -2.34
TRBV9A0A0B4J1U6 AL442644.1-201ENST00000454390 3105 ntBASIC0.42□□□□□ -2.34
TRBV9A0A0B4J1U6 RNY4P14-201ENST00000363656 96 ntBASIC0.42□□□□□ -2.34
TRBV9A0A0B4J1U6 snoU2-30.1-201ENST00000365012 70 ntBASIC0.42□□□□□ -2.34
TRBV9A0A0B4J1U6 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms