Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 Y_RNA.784-201ENST00000613803 101 ntBASIC1.91□□□□□ -2.1
USP44Q9H0E7 Y_RNA.787-201ENST00000616522 101 ntBASIC1.91□□□□□ -2.1
USP44Q9H0E7 Y_RNA.780-201ENST00000617336 101 ntBASIC1.91□□□□□ -2.1
USP44Q9H0E7 Y_RNA.801-201ENST00000619005 101 ntBASIC1.91□□□□□ -2.1
USP44Q9H0E7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USP44Q9H0E7 RNU6-639P-201ENST00000384074 107 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 AC005002.2-201ENST00000438228 269 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
USP44Q9H0E7 RNU6-966P-201ENST00000516479 104 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.9□□□□□ -2.11
USP44Q9H0E7 AL442663.2-201ENST00000554385 511 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 MIR4423-201ENST00000580922 80 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 RAC1P9-201ENST00000604990 392 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 U6.115-201ENST00000636045 103 ntBASIC1.9□□□□□ -2.11
USP44Q9H0E7 Y_RNA.143-201ENST00000363520 106 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 RNA5SP363-201ENST00000365072 115 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 SNORA63.7-201ENST00000365579 123 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 MIR517C-201ENST00000385103 95 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 AL355796.1-201ENST00000406706 323 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 RNU6-985P-201ENST00000410182 104 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.89□□□□□ -2.11
USP44Q9H0E7 AC113618.1-201ENST00000416747 285 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
USP44Q9H0E7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 AC025465.3-201ENST00000510570 311 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 SNORA70.12-201ENST00000516084 153 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 RNU6-397P-201ENST00000516226 104 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 RNU2-12P-201ENST00000517216 168 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.89□□□□□ -2.11
USP44Q9H0E7 AC006380.1-201ENST00000603598 186 ntBASIC1.89□□□□□ -2.11
USP44Q9H0E7 SNORA33-201ENST00000363664 130 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 Y_RNA.380-201ENST00000365663 111 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 SNORA20B-201ENST00000384220 132 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 AL590004.1-201ENST00000405321 300 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 MRPS10P1-201ENST00000448483 130 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 RNU6-764P-201ENST00000516396 105 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 RNU6-1046P-201ENST00000516538 107 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 RNU6-897P-201ENST00000517135 105 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 AC027419.1-201ENST00000522976 328 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 AC015720.1-201ENST00000565251 277 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 AC136932.1-201ENST00000574771 208 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
USP44Q9H0E7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.88□□□□□ -2.11
USP44Q9H0E7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.88□□□□□ -2.11
USP44Q9H0E7 Y_RNA.153-201ENST00000363615 91 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 Y_RNA.422-201ENST00000384054 114 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 Y_RNA.462-201ENST00000384268 102 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 RNU6-937P-201ENST00000384325 106 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 RNA5SP467-201ENST00000391274 118 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 MIR873-201ENST00000401120 77 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 RNU2-54P-201ENST00000410299 190 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 RPL21P9-201ENST00000556149 474 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.87□□□□□ -2.11
USP44Q9H0E7 MIR4438-201ENST00000585271 93 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 AC022441.3-201ENST00000605737 136 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 MIR8074-201ENST00000615081 81 ntBASIC1.87□□□□□ -2.11
USP44Q9H0E7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USP44Q9H0E7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USP44Q9H0E7 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 RNU6-1175P-201ENST00000365200 107 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 RNU6-1160P-201ENST00000384546 104 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 MIR606-201ENST00000384851 96 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USP44Q9H0E7 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 MIR1304-201ENST00000408243 91 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 BTF3P4-201ENST00000418852 495 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 HSPE1P9-201ENST00000440046 311 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 RPS27P22-201ENST00000478056 241 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AC131281.1-201ENST00000522984 164 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AC006504.6-201ENST00000590142 199 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AL355297.3-201ENST00000604082 446 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AC007742.2-201ENST00000618226 398 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 AC099654.10-201ENST00000640395 161 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
USP44Q9H0E7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USP44Q9H0E7 SNORA27.1-201ENST00000362604 124 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 Y_RNA.105-201ENST00000363182 111 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 Y_RNA.183-201ENST00000363882 113 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 SNORA63C-201ENST00000364578 129 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 SNORD63-201ENST00000384262 68 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 MIR320A-201ENST00000385302 82 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 AP1B1P2-201ENST00000416196 106 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 AC010655.3-201ENST00000478818 450 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 303.6 ms