Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.91-201ENST00000363042 107 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.163-201ENST00000363702 113 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RNY1P7-201ENST00000384743 110 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 MIR873-201ENST00000401120 77 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RN7SKP101-201ENST00000411376 320 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RPL39P40-201ENST00000445481 146 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 CYP2C59P-201ENST00000457790 269 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC080013.2-201ENST00000460866 323 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RPL23AP54-201ENST00000495129 419 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP356-201ENST00000515972 94 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 RNU6-1299P-201ENST00000516316 100 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 GTF3AP2-201ENST00000557014 266 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC007012.1-201ENST00000567192 175 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 AC006023.1-201ENST00000603944 259 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 SNORD114-7-201ENST00000362520 77 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.85-201ENST00000363014 111 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 RNU6-271P-201ENST00000363858 105 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP125-201ENST00000364843 120 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 SNORD12C-201ENST00000386307 89 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 RNU2-32P-201ENST00000411193 191 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 AC016717.1-201ENST00000448918 286 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 RNU6-437P-201ENST00000459408 95 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 RNU6-221P-201ENST00000459541 99 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 SNORA40.13-201ENST00000516379 120 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 AL136360.1-201ENST00000503377 1900 ntBASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM40Q8WWA1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 SNORD21-201ENST00000383953 95 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.528-201ENST00000384575 108 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 RNU6-440P-201ENST00000390882 105 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AL355796.1-201ENST00000406706 323 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 EDDM3CP-201ENST00000415977 425 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AL121890.1-201ENST00000435457 205 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AL161788.1-201ENST00000441805 169 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 RPL23AP7-203ENST00000449021 469 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 RNU6-948P-201ENST00000516374 107 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP490-201ENST00000517141 136 ntBASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TMEM40Q8WWA1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 Y_RNA.52-201ENST00000362760 96 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 RNU6-1323P-201ENST00000384025 107 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP496-201ENST00000391240 109 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AL590004.2-201ENST00000404787 371 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 RN7SKP43-201ENST00000516173 320 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 RPL12P50-201ENST00000603116 116 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AL021707.8-201ENST00000609428 183 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AC015726.2-201ENST00000620112 122 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 MIR1248-201ENST00000629190 106 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 AL159152.1-201ENST00000635019 2587 ntBASIC3.24□□□□□ -1.89
TMEM40Q8WWA1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 AC009487.4-201ENST00000624969 3585 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 SNORA27.1-201ENST00000362604 124 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU6-1235P-201ENST00000384559 107 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 MIR1302-5-201ENST00000408164 150 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU2-70P-201ENST00000410718 179 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU2-63P-201ENST00000410792 194 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU2-55P-201ENST00000411146 174 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 HMGN2P18-201ENST00000450680 270 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 AL021397.1-201ENST00000451806 248 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU6-498P-201ENST00000459468 107 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 AC010598.1-201ENST00000510378 103 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU6-109P-201ENST00000516364 107 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU6-184P-201ENST00000516514 107 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 RNU6-63P-201ENST00000516690 95 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 AC025647.1-201ENST00000517879 253 ntBASIC3.23□□□□□ -1.89
TMEM40Q8WWA1 MIR4513-201ENST00000581077 86 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms