Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RAC1P9-201ENST00000604990 392 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 AC005828.6-201ENST00000606610 232 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 MIR3674-201ENST00000636576 68 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.145-201ENST00000363527 102 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 RNU6-926P-201ENST00000384075 107 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 SNORD63-201ENST00000384262 68 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.471-201ENST00000384312 102 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 MIR548F4-201ENST00000408515 105 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.56□□□□□ -2.16
RTL3Q8N8U3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
RTL3Q8N8U3 AC005002.2-201ENST00000438228 269 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 RNU2-12P-201ENST00000517216 168 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.56□□□□□ -2.16
RTL3Q8N8U3 SNORA77B-201ENST00000578179 125 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.772-201ENST00000606692 102 ntBASIC1.56□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 SNORA63D-201ENST00000364359 132 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 SNORA72.2-201ENST00000365028 127 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 RNU6-20P-201ENST00000384106 107 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 AL117342.1-201ENST00000404861 406 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 RNU6-57P-201ENST00000411348 103 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.55□□□□□ -2.16
RTL3Q8N8U3 AC010655.3-201ENST00000478818 450 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
RTL3Q8N8U3 AC136932.1-201ENST00000574771 208 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 AL353997.5-201ENST00000618886 171 ntBASIC1.55□□□□□ -2.16
RTL3Q8N8U3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
RTL3Q8N8U3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RNU6-626P-201ENST00000363354 107 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RNU6-271P-201ENST00000363858 105 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RNU6-457P-201ENST00000363999 107 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 SNORA17.3-201ENST00000391159 129 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RPL21P1-201ENST00000399532 476 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 MIR1253-201ENST00000408273 105 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.54□□□□□ -2.16
RTL3Q8N8U3 RNU6-897P-201ENST00000517135 105 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AC131281.1-201ENST00000522984 164 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 MIR3684-201ENST00000579779 74 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AL360085.1-201ENST00000604713 532 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 AC022441.3-201ENST00000605737 136 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
RTL3Q8N8U3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTL3Q8N8U3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RTL3Q8N8U3 SNORD114-7-201ENST00000362520 77 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 SNORD115-46-201ENST00000390982 71 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 RNU6-482P-201ENST00000391068 107 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 ELOCP20-201ENST00000422460 345 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 snoU13.27-201ENST00000459278 104 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RTL3Q8N8U3 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 RNU6-966P-201ENST00000516479 104 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AC005176.2-201ENST00000596933 147 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AC004467.1-201ENST00000615678 330 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AC006001.4-201ENST00000622243 395 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 AC006435.5-201ENST00000624486 112 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 U6.115-201ENST00000636045 103 ntBASIC1.53□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.105-201ENST00000363182 111 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNA5SP99-201ENST00000364020 114 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU2-54P-201ENST00000410299 190 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU6-121P-201ENST00000410525 99 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AL390729.2-201ENST00000416137 156 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 HMGN2P34-201ENST00000437647 269 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.52□□□□□ -2.17
RTL3Q8N8U3 MTND5P22-201ENST00000458380 195 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 SNORD65B-201ENST00000459126 73 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms