Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ZNF140P52738 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 RNU1-133P-201ENST00000364867 167 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 Y_RNA.402-201ENST00000383972 102 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 Y_RNA.450-201ENST00000384198 113 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 Y_RNA.557-201ENST00000384680 107 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 MIR181A1-201ENST00000385026 110 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 AC016907.1-201ENST00000419483 435 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 AL589823.1-201ENST00000429577 183 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 USP9YP16-201ENST00000430287 407 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 MTND2P22-201ENST00000444325 1033 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 USP9YP23-201ENST00000455085 407 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 RNU7-21P-201ENST00000459430 62 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 MTND5P5-201ENST00000503764 376 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 RNU6-947P-201ENST00000516264 106 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 RNU6-1291P-201ENST00000516591 104 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 AC245505.1-201ENST00000556398 224 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 EIF1P4-201ENST00000572664 335 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 AC018462.2-201ENST00000605375 395 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 SNORA28-201ENST00000606769 126 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.47□□□□□ -2.33
ZNF140P52738 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ZNF140P52738 RNY1P16-201ENST00000363063 111 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 Y_RNA.267-201ENST00000364679 109 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
ZNF140P52738 MIR190B-201ENST00000401119 79 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 MIR1287-201ENST00000408492 90 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.46□□□□□ -2.34
ZNF140P52738 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.46□□□□□ -2.34
ZNF140P52738 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC104332.1-201ENST00000440471 797 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC093534.1-201ENST00000504977 132 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 Y_RNA.670-201ENST00000516255 105 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 RNU6-107P-201ENST00000516643 102 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 RNU7-28P-201ENST00000516759 62 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.46□□□□□ -2.34
ZNF140P52738 AC055872.1-201ENST00000570978 278 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.46□□□□□ -2.34
ZNF140P52738 MIR4273-201ENST00000582824 84 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC080013.6-201ENST00000606185 215 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC100812.1-201ENST00000607622 580 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC104465.1-201ENST00000611365 139 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC090517.2-201ENST00000614966 680 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 MIR6128-201ENST00000615528 109 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 AC100810.6-201ENST00000638068 285 ntBASIC0.46□□□□□ -2.34
ZNF140P52738 Y_RNA.243-201ENST00000364481 109 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 Y_RNA.265-201ENST00000364677 108 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNU6-407P-201ENST00000365280 104 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 Y_RNA.364-201ENST00000365532 101 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AL451046.2-201ENST00000403074 277 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNA5SP247-201ENST00000411181 105 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNU6-373P-201ENST00000411247 98 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 USMG5P1-201ENST00000425964 177 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 PCNPP5-201ENST00000452246 481 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNU7-12P-201ENST00000516030 62 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNU4-49P-201ENST00000516080 140 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 RNU6-63P-201ENST00000516690 95 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 Y_RNA.706-201ENST00000516933 99 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AP002004.2-201ENST00000531656 154 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AC018448.1-201ENST00000552843 316 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AC090617.3-201ENST00000573670 475 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 AC015540.1-201ENST00000615828 501 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
ZNF140P52738 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
ZNF140P52738 AC073544.1-201ENST00000600110 1595 ntBASIC0.45□□□□□ -2.34
ZNF140P52738 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-833P-201ENST00000363486 107 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU5F-3P-201ENST00000363767 117 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU4-12P-201ENST00000365233 139 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 Y_RNA.336-201ENST00000365307 109 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 Y_RNA.339-201ENST00000365325 102 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 Y_RNA.436-201ENST00000384097 102 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 Y_RNA.516-201ENST00000384541 124 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNA5SP482-201ENST00000391269 118 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 MIR873-201ENST00000401120 77 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 MIR548K-201ENST00000408406 116 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 Y_RNA.594-201ENST00000410373 140 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 UQCRBP2-201ENST00000447827 297 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 AC245047.8-201ENST00000456455 284 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-329P-201ENST00000459618 107 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 SNORA25.10-201ENST00000515926 124 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-720P-201ENST00000516363 108 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.44□□□□□ -2.34
ZNF140P52738 AC018638.8-201ENST00000588755 281 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 7SK.7-201ENST00000603504 247 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.44□□□□□ -2.34
ZNF140P52738 MIR3688-2-201ENST00000636963 87 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 MIR3662-201ENST00000637030 95 ntBASIC0.44□□□□□ -2.34
ZNF140P52738 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
ZNF140P52738 Y_RNA.3-201ENST00000362331 103 ntBASIC0.43□□□□□ -2.34
ZNF140P52738 Y_RNA.9-201ENST00000362354 101 ntBASIC0.43□□□□□ -2.34
ZNF140P52738 Y_RNA.157-201ENST00000363638 102 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms