Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU2-61P-201ENST00000411069 191 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 AC091021.1-201ENST00000468051 388 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 RNU6-436P-201ENST00000516171 114 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 MIR4769-201ENST00000584126 77 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 AC091178.2-201ENST00000584401 117 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCD3P28288 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ABCD3P28288 ICE2P2-201ENST00000483823 2787 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU6-1123P-201ENST00000362347 106 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 Y_RNA.138-201ENST00000363462 102 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 Y_RNA.331-201ENST00000365267 102 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 MIR194-1-201ENST00000384892 85 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU6-1337P-201ENST00000516525 95 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU7-28P-201ENST00000516759 62 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU2-56P-201ENST00000516826 190 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 RNU7-110P-201ENST00000516891 62 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 Y_RNA.715-201ENST00000517082 110 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AL358944.1-201ENST00000528537 144 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AP002004.2-201ENST00000531656 154 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCD3P28288 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCD3P28288 AC016925.2-201ENST00000605108 242 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 AC040896.1-201ENST00000613819 479 ntBASIC1.74□□□□□ -2.13
ABCD3P28288 SNORD33-201ENST00000362761 85 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 RNU6-203P-201ENST00000384038 104 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 RNU6-21P-201ENST00000384710 107 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 RNU6-823P-201ENST00000391042 103 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 Y_RNA.645-201ENST00000391229 102 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 AC024067.1-201ENST00000426199 223 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCD3P28288 HSPE1P24-201ENST00000450782 238 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 AC005908.1-201ENST00000468701 347 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCD3P28288 AC108210.2-201ENST00000503681 201 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 Y_RNA.701-201ENST00000516812 110 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 CBX3P4-201ENST00000538909 354 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 MIR3171-201ENST00000584270 74 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCD3P28288 AC021506.2-201ENST00000612354 169 ntBASIC1.73□□□□□ -2.13
ABCD3P28288 Y_RNA.380-201ENST00000365663 111 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 SNORA22B-201ENST00000383876 138 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 MIR1252-201ENST00000408861 65 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 AL162725.1-201ENST00000435405 301 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCD3P28288 AC099513.1-201ENST00000490423 301 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCD3P28288 AC020661.2-201ENST00000560114 134 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 AL513423.1-201ENST00000621695 132 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCD3P28288 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
ABCD3P28288 Y_RNA.143-201ENST00000363520 106 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 Y_RNA.158-201ENST00000363651 101 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 Y_RNA.202-201ENST00000364083 110 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 Y_RNA.267-201ENST00000364679 109 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 Y_RNA.389-201ENST00000383924 113 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 RNU6-937P-201ENST00000384325 106 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 RNU6-482P-201ENST00000391068 107 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 MIR1289-2-201ENST00000408360 111 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 RNU6-130P-201ENST00000411112 103 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 RNU6-1096P-201ENST00000517089 102 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 AC044792.1-201ENST00000593294 196 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 AL021879.1-201ENST00000611756 288 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 PART1_1.1-201ENST00000611761 217 ntBASIC1.71□□□□□ -2.14
ABCD3P28288 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
ABCD3P28288 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCD3P28288 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ABCD3P28288 Y_RNA.183-201ENST00000363882 113 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 RNU4-76P-201ENST00000364509 141 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 Y_RNA.265-201ENST00000364677 108 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 Y_RNA.329-201ENST00000365209 107 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 RNU1-78P-201ENST00000391248 165 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 STAG3L5P-204ENST00000443759 179 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCD3P28288 SEPT14P8-201ENST00000508026 178 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 RNU6-966P-201ENST00000516479 104 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCD3P28288 AC015712.3-201ENST00000559380 164 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 AC104695.3-201ENST00000604052 296 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 SNORD113-5-201ENST00000607261 78 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.7□□□□□ -2.14
ABCD3P28288 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCD3P28288 AC073349.3-201ENST00000617616 186 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 309.2 ms