Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSPG5O95196 AC010615.1-201ENST00000594254 1764 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 Y_RNA.210-201ENST00000364161 110 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 RNA5SP475-201ENST00000410568 110 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC016909.1-201ENST00000415916 166 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 MTND2P23-201ENST00000422990 651 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC005002.2-201ENST00000438228 269 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CSPG5O95196 RNU6-221P-201ENST00000459541 99 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 MTATP8P1-201ENST00000467115 207 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC010655.3-201ENST00000478818 450 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 RNU6-897P-201ENST00000517135 105 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC005176.2-201ENST00000596933 147 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 AC004467.1-201ENST00000615678 330 ntBASIC1.84□□□□□ -2.11
CSPG5O95196 snoU2-30.2-201ENST00000362805 70 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 Y_RNA.162-201ENST00000363683 102 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 RNU6-1019P-201ENST00000364424 107 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 SNORA63.7-201ENST00000365579 123 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 Y_RNA.380-201ENST00000365663 111 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 RNU6-937P-201ENST00000384325 106 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 RNU6-738P-201ENST00000384531 106 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CSPG5O95196 CST2P1-201ENST00000425770 87 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AC069257.2-201ENST00000441819 155 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 Y_RNA.720-201ENST00000517166 92 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
CSPG5O95196 AC025647.1-201ENST00000517879 253 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.83□□□□□ -2.12
CSPG5O95196 AC136932.1-201ENST00000574771 208 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AC008737.2-201ENST00000599446 118 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AL355297.3-201ENST00000604082 446 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AL512598.1-201ENST00000610158 273 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.83□□□□□ -2.12
CSPG5O95196 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 MIR410-201ENST00000362222 80 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 Y_RNA.101-201ENST00000363154 102 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 Y_RNA.105-201ENST00000363182 111 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 SNORA72.2-201ENST00000365028 127 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 AC004965.1-201ENST00000413033 213 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.82□□□□□ -2.12
CSPG5O95196 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
CSPG5O95196 MRPS35P2-201ENST00000508242 191 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 AC025465.3-201ENST00000510570 311 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 RNU6-327P-201ENST00000516270 127 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 RNU1-92P-201ENST00000517017 135 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 MIR8074-201ENST00000615081 81 ntBASIC1.82□□□□□ -2.12
CSPG5O95196 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.82□□□□□ -2.12
CSPG5O95196 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
CSPG5O95196 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
CSPG5O95196 Y_RNA.26-201ENST00000362539 101 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 RNU6-806P-201ENST00000365147 105 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 Y_RNA.327-201ENST00000365201 102 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
CSPG5O95196 MIR1267-201ENST00000408723 78 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.81□□□□□ -2.12
CSPG5O95196 ELOCP20-201ENST00000422460 345 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 HSPE1P9-201ENST00000440046 311 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.81□□□□□ -2.12
CSPG5O95196 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC027419.1-201ENST00000522976 328 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC084364.2-201ENST00000546924 395 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.81□□□□□ -2.12
CSPG5O95196 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 AC103810.8-201ENST00000607347 118 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 MIR338-201ENST00000636369 67 ntBASIC1.81□□□□□ -2.12
CSPG5O95196 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.145-201ENST00000363527 102 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.183-201ENST00000363882 113 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.214-201ENST00000364201 112 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 RNU6-1240P-201ENST00000365155 104 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 RNU6-1175P-201ENST00000365200 107 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 RNU6-1310P-201ENST00000384153 107 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.459-201ENST00000384251 102 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.8□□□□□ -2.12
CSPG5O95196 RNU4-30P-201ENST00000410245 143 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 RNY3P15-201ENST00000516297 97 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 SNORA40.15-201ENST00000516884 107 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 Y_RNA.713-201ENST00000517013 96 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.8□□□□□ -2.12
CSPG5O95196 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 MIR4423-201ENST00000580922 80 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 AL353149.1-201ENST00000610667 244 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
CSPG5O95196 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSPG5O95196 MIR515-2-201ENST00000384883 83 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms