Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-360P-201ENST00000390944 104 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 MIR1267-201ENST00000408723 78 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNA5SP475-201ENST00000410568 110 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 JTBP1-201ENST00000441314 247 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 snoU13.27-201ENST00000459278 104 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNU7-34P-201ENST00000459394 64 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC010598.1-201ENST00000510378 103 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC025465.3-201ENST00000510570 311 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC074133.1-201ENST00000515696 183 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNU6-63P-201ENST00000516690 95 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNU7-4P-201ENST00000516961 62 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC144568.1-201ENST00000520139 137 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC022432.1-201ENST00000595739 310 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AC073413.2-201ENST00000604332 360 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AP001485.1-201ENST00000604799 199 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 AL133255.1-201ENST00000606374 441 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 U2.1-201ENST00000618978 145 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 U6.115-201ENST00000636045 103 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 SNORD26-201ENST00000384147 75 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 COX6CP10-201ENST00000416832 224 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AC018865.2-201ENST00000423631 129 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 MRPS10P1-201ENST00000448483 130 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 snoU13.9-201ENST00000458927 103 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AL442163.3-201ENST00000554110 156 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AC006600.1-201ENST00000572529 153 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AP001094.1-201ENST00000579805 193 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AC092447.9-201ENST00000603395 144 ntBASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NKX2-6A6NCS4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNY1-201ENST00000364228 113 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 SNORA72.2-201ENST00000365028 127 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 MIR628-201ENST00000385229 95 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU6-440P-201ENST00000390882 105 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 MTND1P14-201ENST00000427400 950 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 AC245047.3-201ENST00000429428 127 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU7-152P-201ENST00000458982 64 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RPS26P45-201ENST00000471748 340 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 AC099513.1-201ENST00000490423 301 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNA5SP20-201ENST00000515976 84 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNA5SP481-201ENST00000516814 122 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 RNU7-172P-201ENST00000517125 64 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 SNORD116.3-201ENST00000517176 78 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 CYCSP23-201ENST00000519781 313 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 AC024995.1-201ENST00000523014 93 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 MIR4709-201ENST00000577272 72 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 MIR4659A-201ENST00000580269 81 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 MIR8054-201ENST00000620877 86 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 U6.92-201ENST00000636464 89 ntBASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NKX2-6A6NCS4 ICE2P2-201ENST00000483823 2787 ntBASIC1.09□□□□□ -2.24
NKX2-6A6NCS4 MIR369-201ENST00000362155 70 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 SNORA27.1-201ENST00000362604 124 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 RNU6-626P-201ENST00000363354 107 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 RNU6-20P-201ENST00000384106 107 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 MIR515-2-201ENST00000384883 83 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 MIR515-1-201ENST00000384884 83 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 RNU6-308P-201ENST00000390957 107 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC236972.2-201ENST00000434979 310 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC099799.1-201ENST00000439809 192 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 RPEP5-201ENST00000441137 268 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC069257.2-201ENST00000441819 155 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC112492.4-201ENST00000456549 352 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC097462.1-201ENST00000514125 324 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 FAM106DP-201ENST00000586416 501 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AL117336.2-201ENST00000602435 335 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AL021879.1-201ENST00000611756 288 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC021506.2-201ENST00000612354 169 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 AC007485.1-201ENST00000616755 206 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms