Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 RNU6-1107P-201ENST00000364817 104 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 RNU6-756P-201ENST00000383997 107 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 AL139095.1-201ENST00000404326 391 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 AL135938.1-201ENST00000443141 297 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 AC090515.1-201ENST00000465295 476 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 RNU6-197P-201ENST00000516680 100 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 IGKV1-22-201ENST00000524313 326 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 AC018630.3-201ENST00000542637 96 ntBASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.32□□□□□ -1.88
TMEM40Q8WWA1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 SNORD116-13-201ENST00000384408 92 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 RNU6-136P-201ENST00000384663 107 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 CKS1BP2-201ENST00000497342 240 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 ATP5EP1-201ENST00000510257 156 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMEM40Q8WWA1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU6-766P-201ENST00000362478 107 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 SNORA5B-201ENST00000363786 132 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 SNORA68.1-201ENST00000364537 132 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 SNORD31B-201ENST00000364977 69 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.328-201ENST00000365208 113 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 MIR488-201ENST00000365739 83 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU6-1080P-201ENST00000383982 107 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU6-484P-201ENST00000384016 107 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 MIR518C-201ENST00000384822 101 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 MIR1263-201ENST00000408324 86 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU6-965P-201ENST00000516721 96 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 MIR4672-201ENST00000583126 81 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 MIR5739-201ENST00000619803 80 ntBASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM40Q8WWA1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.281-201ENST00000364774 94 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.432-201ENST00000384087 111 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 SNORA51.5-201ENST00000384126 131 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 SNORD14D-201ENST00000384390 87 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.549-201ENST00000384657 102 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 MIR184-201ENST00000384962 84 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 FO393413.1-201ENST00000402892 195 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 AL031121.1-201ENST00000406553 254 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 RN7SKP132-201ENST00000516001 208 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 POLR3GP1-201ENST00000594073 261 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 AL049861.1-201ENST00000603130 150 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 AC009831.4-201ENST00000620744 325 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 AC007318.2-201ENST00000620999 243 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
TMEM40Q8WWA1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU4-41P-201ENST00000364426 143 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-438P-201ENST00000365561 103 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-975P-201ENST00000384296 105 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-592P-201ENST00000411333 103 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-57P-201ENST00000411348 103 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RN7SL20P-201ENST00000488827 297 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 AC023141.11-201ENST00000508864 202 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-412P-201ENST00000516434 106 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 RNU6-1337P-201ENST00000516525 95 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 AP003357.1-201ENST00000604497 148 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 AL022345.2-201ENST00000606307 135 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
TMEM40Q8WWA1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM40Q8WWA1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 272.4 ms