Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPEP5-201ENST00000441137 268 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 UQCRBP2-201ENST00000447827 297 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 HSPE1P24-201ENST00000450782 238 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-498P-201ENST00000459468 107 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNA5SP481-201ENST00000516814 122 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 AP002001.1-203ENST00000534002 267 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 AC018448.1-201ENST00000552843 316 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 MIR4659A-201ENST00000580269 81 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 AC040896.1-201ENST00000613819 479 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 AL078596.1-201ENST00000624856 447 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-961P-201ENST00000363893 105 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 SNORA63C-201ENST00000364578 129 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.455-201ENST00000384230 98 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 RNU6-1160P-201ENST00000384546 104 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AL590004.1-201ENST00000405321 300 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 MIR1252-201ENST00000408861 65 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 RNU6-130P-201ENST00000411112 103 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 RNU6-221P-201ENST00000459541 99 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 SCARNA15.1-201ENST00000516384 125 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 RNU1-117P-201ENST00000517041 158 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.715-201ENST00000517082 110 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AC113195.1-201ENST00000579952 141 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 MIR4423-201ENST00000580922 80 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AL390123.1-201ENST00000603216 237 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AL353621.2-201ENST00000605340 133 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 AL021879.1-201ENST00000611756 288 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 PART1_1.1-201ENST00000611761 217 ntBASIC1.6□□□□□ -2.15
RTL3Q8N8U3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.6□□□□□ -2.15
RTL3Q8N8U3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RTL3Q8N8U3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.424-201ENST00000384063 103 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 RNU6-738P-201ENST00000384531 106 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 RAB28P5-201ENST00000427490 651 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 RNU7-57P-201ENST00000459540 60 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.59□□□□□ -2.15
RTL3Q8N8U3 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 RPS29P30-201ENST00000600975 111 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 AC124312.5-201ENST00000604451 268 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 snoZ196.1-201ENST00000625269 89 ntBASIC1.59□□□□□ -2.15
RTL3Q8N8U3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.59□□□□□ -2.15
RTL3Q8N8U3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RTL3Q8N8U3 AC100821.1-201ENST00000523153 2479 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC060773.1-201ENST00000421698 310 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 CST2P1-201ENST00000425770 87 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC245047.4-201ENST00000433189 144 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC073910.1-201ENST00000445047 438 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC016717.1-201ENST00000448918 286 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 RNU6-625P-201ENST00000459412 107 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 U8.20-201ENST00000459445 131 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 RNU6-764P-201ENST00000516396 105 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.58□□□□□ -2.16
RTL3Q8N8U3 MIR4769-201ENST00000584126 77 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC006504.6-201ENST00000590142 199 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AL355297.3-201ENST00000604082 446 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AP001485.1-201ENST00000604799 199 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AL353149.1-201ENST00000610667 244 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 AC011476.5-201ENST00000615594 130 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
RTL3Q8N8U3 ICE2P2-201ENST00000483823 2787 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNU6-454P-201ENST00000364292 107 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNU6-450P-201ENST00000364654 107 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.389-201ENST00000383924 113 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 MIR606-201ENST00000384851 96 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNU6-101P-201ENST00000410323 104 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 AC016909.1-201ENST00000415916 166 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 AC113618.1-201ENST00000416747 285 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNU6-408P-201ENST00000515910 100 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 AC025647.1-201ENST00000517879 253 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.57□□□□□ -2.16
RTL3Q8N8U3 AC055872.1-201ENST00000570978 278 ntBASIC1.57□□□□□ -2.16
RTL3Q8N8U3 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms