Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.485-201ENST00000384395 102 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 Y_RNA.570-201ENST00000384750 101 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ABCD3P28288 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 RN7SKP200-201ENST00000410564 320 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 PMCHL1-202ENST00000423102 261 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
ABCD3P28288 RNU7-34P-201ENST00000459394 64 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
ABCD3P28288 AC055872.1-201ENST00000570978 278 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 MIR4423-201ENST00000580922 80 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 AC022441.3-201ENST00000605737 136 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 AC127459.3-201ENST00000624328 466 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.81□□□□□ -2.12
ABCD3P28288 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ABCD3P28288 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCD3P28288 SNORA4.2-201ENST00000365313 147 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 SNORA63.7-201ENST00000365579 123 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 Y_RNA.446-201ENST00000384178 104 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 RNU6-376P-201ENST00000384731 106 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 AL031003.1-201ENST00000404229 172 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 MTCO2P12-201ENST00000427426 682 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 HSPE1P13-201ENST00000451143 297 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 snoU13.9-201ENST00000458927 103 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 RNU6-155P-201ENST00000516347 100 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 AC022616.4-201ENST00000522985 181 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 AL162424.1-201ENST00000602325 221 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCD3P28288 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCD3P28288 MIR6079-201ENST00000635807 62 ntBASIC1.8□□□□□ -2.12
ABCD3P28288 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ABCD3P28288 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ABCD3P28288 AC091812.1-201ENST00000432235 1948 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCD3P28288 MIR424-201ENST00000362227 98 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 Y_RNA.31-201ENST00000362574 102 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 RNU6-1175P-201ENST00000365200 107 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 AC117470.1-201ENST00000381974 330 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 RNU6-474P-201ENST00000384243 107 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 Y_RNA.471-201ENST00000384312 102 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 RNU6-308P-201ENST00000390957 107 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 MIR548P-201ENST00000408336 84 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 RPL23AP36-201ENST00000413895 458 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 MTND1P14-201ENST00000427400 950 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCD3P28288 AL606517.2-201ENST00000442855 241 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 AC005042.3-201ENST00000453230 174 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 Y_RNA.721-201ENST00000517207 102 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 DEFB122-202ENST00000569013 197 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 MIR8054-201ENST00000620877 86 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.79□□□□□ -2.12
ABCD3P28288 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCD3P28288 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 Y_RNA.124-201ENST00000363339 93 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 Y_RNA.148-201ENST00000363557 117 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 Y_RNA.551-201ENST00000384661 102 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 MIR520G-201ENST00000385064 90 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 RPEP5-201ENST00000441137 268 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
ABCD3P28288 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-324P-201ENST00000363957 106 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-117P-201ENST00000365415 107 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 Y_RNA.394-201ENST00000383942 103 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 SNORD63-201ENST00000384262 68 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-505P-201ENST00000384427 107 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-440P-201ENST00000390882 105 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-1199P-201ENST00000411249 104 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCD3P28288 RNU6-341P-201ENST00000516973 96 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 SNORA28-201ENST00000606769 126 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 AC011373.1-201ENST00000607270 237 ntBASIC1.77□□□□□ -2.13
ABCD3P28288 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCD3P28288 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCD3P28288 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 RNU6-1031P-201ENST00000384773 107 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 AL034345.1-201ENST00000407768 123 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 AL161935.2-201ENST00000414627 60 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 AL354751.2-201ENST00000415471 210 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCD3P28288 SNORA31.10-201ENST00000516482 106 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 Y_RNA.711-201ENST00000516993 102 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCD3P28288 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.76□□□□□ -2.13
ABCD3P28288 AC124312.5-201ENST00000604451 268 ntBASIC1.76□□□□□ -2.13
ABCD3P28288 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCD3P28288 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ABCD3P28288 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ABCD3P28288 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.75□□□□□ -2.13
ABCD3P28288 RNU6-101P-201ENST00000410323 104 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 RNU6-710P-201ENST00000410424 105 ntBASIC1.75□□□□□ -2.13
ABCD3P28288 RNU2-20P-201ENST00000410425 191 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 236.6 ms