Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 RNU6-280P-201ENST00000364145 104 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 RNU6-933P-201ENST00000384424 107 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 MIR516B2-201ENST00000385190 85 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 RNA5SP193-201ENST00000410353 107 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 ELOCP21-201ENST00000412558 336 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 MTATP6P19-201ENST00000413797 659 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AC243428.1-201ENST00000421099 264 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AC073464.1-201ENST00000429823 534 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.06□□□□□ -2.4
UBBP0CG47 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.06□□□□□ -2.4
UBBP0CG47 MTND1P11-201ENST00000456661 876 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 RNU7-43P-201ENST00000516554 64 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 RNU6-405P-201ENST00000516637 110 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.06□□□□□ -2.4
UBBP0CG47 AC104695.3-201ENST00000604052 296 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AP001330.5-201ENST00000607176 411 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 AF250324.2-201ENST00000608299 610 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.05□□□□□ -2.4
UBBP0CG47 MIR410-201ENST00000362222 80 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-407P-201ENST00000365280 104 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 SNORD14.1-201ENST00000365609 90 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-1264P-201ENST00000383891 107 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-95P-201ENST00000384697 107 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU1-139P-201ENST00000391307 165 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 MIR873-201ENST00000401120 77 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-648P-201ENST00000410190 107 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.05□□□□□ -2.4
UBBP0CG47 MTND1P4-201ENST00000435196 415 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RPS20P10-201ENST00000451209 253 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.05□□□□□ -2.4
UBBP0CG47 AC083798.1-201ENST00000472671 131 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNA5SP401-201ENST00000515920 127 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-1278P-201ENST00000516130 107 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 Y_RNA.683-201ENST00000516508 93 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 RNU6-835P-201ENST00000516974 104 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 MIR3684-201ENST00000579779 74 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AC040904.1-201ENST00000590850 223 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AL138726.1-201ENST00000614873 333 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AL357075.2-201ENST00000614906 189 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 AL591926.4-201ENST00000616895 298 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.05□□□□□ -2.4
UBBP0CG47 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
UBBP0CG47 RNU5F-3P-201ENST00000363767 117 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 SNORA72.3-201ENST00000365074 132 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 RNU4-66P-201ENST00000365199 138 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 RNU6-281P-201ENST00000384212 103 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.04□□□□□ -2.4
UBBP0CG47 MTND1P27-201ENST00000451117 902 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 RNU6-261P-201ENST00000459506 102 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 RPS3AP17-201ENST00000472594 777 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.04□□□□□ -2.4
UBBP0CG47 AC134698.4-201ENST00000523451 826 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC026371.1-201ENST00000551867 419 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.04□□□□□ -2.4
UBBP0CG47 AC125232.2-201ENST00000592457 143 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC010620.1-201ENST00000601088 1102 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 RBM11P1-201ENST00000604951 799 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC015726.2-201ENST00000620112 122 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC127459.3-201ENST00000624328 466 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 AC008133.2-201ENST00000624540 351 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 U6.115-201ENST00000636045 103 ntBASIC0.04□□□□□ -2.4
UBBP0CG47 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
UBBP0CG47 RNU6-254P-201ENST00000363377 107 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 Y_RNA.135-201ENST00000363439 95 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 RNU6-454P-201ENST00000364292 107 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 RNU6-128P-201ENST00000383976 107 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 SNORA75-201ENST00000384158 137 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 MIR518A1-201ENST00000385068 85 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 MIR136-201ENST00000385207 82 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 AL590632.1-201ENST00000424289 371 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 AL353572.1-201ENST00000442490 417 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 MTND3P16-201ENST00000452205 344 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 snoU13.21-201ENST00000459368 105 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 SNORD123-201ENST00000459473 70 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 NDUFA4P2-201ENST00000489989 244 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 RNU6-1114P-201ENST00000516022 107 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 SNORA18.7-201ENST00000516910 131 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 MIR3612-201ENST00000579753 87 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
UBBP0CG47 Y_RNA.1-201ENST00000352915 104 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 MIR1-1-201ENST00000362147 71 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 SNORD68-201ENST00000363214 84 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 SNORD45.3-201ENST00000363836 72 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 RNA5SP517-201ENST00000364724 117 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 RNU6-580P-201ENST00000365159 107 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 SNORA2B-201ENST00000384583 137 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 MIR15B-201ENST00000385045 98 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 MTCYBP4-201ENST00000401524 249 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 RNU6-1001P-201ENST00000411265 100 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 MTND3P23-201ENST00000431980 347 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 RNU7-66P-201ENST00000459469 62 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.02□□□□□ -2.41
UBBP0CG47 AC074133.1-201ENST00000515696 183 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 RNU6-63P-201ENST00000516690 95 ntBASIC0.02□□□□□ -2.41
UBBP0CG47 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms